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ProteomicsQuantification of ATIs in Wheat by LC-MS/MS – LFQ IonTrap
A selection of ATIs was silenced in the common wheat cultivar Bobwhite and durum wheat cultivar Svevo by RNAi and gene editing, respectively, in order to reduce the amounts of ATIs. The controls and silenced lines were analyzed after digestion to peptides by LC-MS/MS with different approaches to eva...
ORGANISM(S): Triticum aestivum (Wheat) 
2022-10-14 | PXD034769 | Pride
Amylase/trypsin inhibitor  wheat  crsipr-cas9  rnai 
ProteomicsPichia pastoris organelles by LC-ESI-MS
Organelles from Pichia, either grown on glucose or methanol were purified and analysed using LC-ESI-MS. Two biological replicates each had been analyzed leading to four replicate data sets for every organelle. Organelles analyzed: cis golgi, trans golgi, plasma membrane, microsomes, cytosol, vacuole...
ORGANISM(S): Komagataella pastoris (Yeast) (Pichia pastoris) 
2020-05-26 | PXD011220 | Pride
Organelle preparation Pichia pastoris 
ProteomicsSystems-level organisation of yeast methylotrophic lifestyle
Changes in the proteome of Pichia pastoris cultures either grown on glucose or methanol were analysed using a 2D-chromatography based TMT labeling LC-ESI-MS workflow. Three biological replicates, with two technical replicates each, had been analyzed leading to six replicate data sets of both growth ...
ORGANISM(S): Komagataella pastoris DSMZ 70382 
2015-10-01 | PXD002036 | Pride
Pichia pastoris Tmt Lc-msms 
ProteomicsSystems-level organisation of yeast methylotrophic lifestyle - organelle preparation
Changes in the proteome of Pichia pastoris cultures either grown on glucose or methanol were analysed using a 2D-chromatography based TMT labeling LC-ESI-MS workflow. Three biological replicates, with two technical replicates each, had been analyzed leading to six replicate data sets of both growth ...
ORGANISM(S): Komagataella pastoris DSMZ 70382 
2015-10-01 | PXD002831 | Pride
Lc-esi-ms Peroxisomal preparation 
UnknownEffect of Minocycline on Depressive Symptoms in Patients With Treatment-Resistant Depression: A Randomized Clinical Trial.
Not available
S-EPMC9475381 | biostudies-literature
GenomicsGenome-Wide Transcriptome and Chromatin Analysis of Aspergillus nidulans Primary and Secondary Metabolism Reveals Crucial Function for a Kdm5-Family Histone Demethylase.
Histone posttranslational modifications (HPTMs) are involved in regulating the synthesis of fungal bioactive compounds. The exact molecular mechanisms of the silencing/activation of secondary metabolism (SM) clusters by these epigenetic events however are not yet fully understood. This work applies ...
ORGANISM(S): Aspergillus nidulans 
2016-04-01 | E-GEOD-72126 | biostudies-arrayexpress
TranscriptomicsKdmA, a histone H3 demethylase with bipartite function, differentially regulates primary and secondary in Aspergillus nidulans metabolism
A. nidulans kdmA encodes a member of the KDM4 family of jumonji histone demethylase proteins, highly similar to metazoan orthologues both within functional domains and in domain architecture. This family of proteins exhibits demethylase activity toward lysines 9 and 36 of histone H3 and plays a prom...
ORGANISM(S): Aspergillus nidulans 
2014-11-26 | E-GEOD-63672 | biostudies-arrayexpress
UnknownSARS-CoV-2 vaccination modelling for safe surgery to save lives: data from an international prospective cohort study.
Not available
S-EPMC7995808 | biostudies-literature
UnknownTiming of surgery following SARS-CoV-2 infection: an international prospective cohort study.
Not available
S-EPMC8206995 | biostudies-literature
UnknownSARS-CoV-2 infection and venous thromboembolism after surgery: an international prospective cohort study.
Not available
S-EPMC8652887 | biostudies-literature
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