Guo Xu X - OmicsDI

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Unknown (7595)
Proteomics (183)
Metabolomics (43)
Transcriptomics (33)
Genomics (24)
Multiomics (3)

Organisms

Homo sapiens (95)
Allexis (86)
Arabidopsis thaliana (86)
Callinectes sapidus (86)
Cyanophora paradoxa (86)
Ensifer adhaerens (86)
Entamoeba histolytica (86)
Escherichia coli (86)
Histomonas meleagridis (86)
Leishmania major strain Friedlin (86)
Mus musculus (27)
Arabidopsis thaliana (4)
Caenorhabditis elegans (3)
Citrus sinensis (2)
Rattus norvegicus (2)
Brassica oleracea (1)
Clonorchis sinensis (1)
Oryza sativa (1)
Setaria italica (1)
Sinorhizobium meliloti (1)
Saccharomyces cerevisiae (1)
Sus scrofa (1)
Cancer (1)
Human parechovirus strain T82-0169 (1)
Morchella sextelata (1)
Oryctolagus cuniculus (1)
Rheum palmatum (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Streptomyces lividans TK24 (1)
Trichuris sp. ex Homo sapiens JP-2011 (1)

Organisms

Mus musculus (1)

Repository

iProX (87)
pride (86)
biostudies-arrayexpress (45)
MetaboLights (40)
EGA (11)
MassIVE (7)
GNPS (3)
PeptideAtlas (3)
ENA (1)

Tissue

Cell culture (16)
Epithelial cell (9)
Brain (6)
Liver (6)
Lung (6)
Plant cell (5)
Whole body (5)
Leaf (4)
Skin (4)
Others (3)
Colon (3)
Kidney (3)
Permanent cell line cell (3)
Retina (3)
Spleen (3)
Blood (2)
Byssus (2)
Choroid (2)
Heart (2)
Pancreas (2)
Sclera (2)
Shoot (2)
Stomach (2)
Testis (2)
B-cell lymphoma cell (1)
Blood cell (1)
Blood plasma (1)
Blood serum (1)
Blood vessel (1)
Cell line cell (1)

Disease

Colon cancer (3)
Disease free (3)
Brain cancer (2)
Breast cancer (2)
Cervix carcinoma (2)
Liver cancer (2)
Acute leukemia (1)
Brain glioblastoma multiforme (1)
Esophageal cancer (1)
Kidney cancer (1)
Lung cancer (1)
Lymphoma (1)
Malignant neoplasm of ovary (1)
Myopia (1)
Non-alcoholic steatohepatitis (1)
Pancreatitis (1)
Polycystic Kidney (1)
Prostate adenocarcinoma (1)
Prostate cancer (1)
Severe acute respiratory syndrome (1)
Stage IV colorectal cancer (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (86)
Shotgun proteomics (44)
Mass spectrometry (36)
Gel-based experiment (12)
Bottom-up proteomics (10)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-dependent acquisition (6)
Data-independent acquisition (5)
Top-down proteomics (4)
Mass spectrometry assay (3)
SWATH MS (3)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Mass spectrometry imaging (1)
Metaproteomics (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (20)
Liquid Chromatography MS - negative - reverse phase (18)
Liquid Chromatography MS - positive - hilic (5)
Liquid Chromatography MS - negative - hilic (4)
Q Exactive HF (3)
LTQ Orbitrap Velos Pro (2)
TripleTOF 6600 (2)
Liquid Chromatography MS - - reverse phase (2)
Liquid Chromatography MS - alternating - hilic (2)
Illumina HiSeq 1000 (1)
Illumina NovaSeq 6000 (1)
Exactive Plus (1)
Orbitrap Eclipse (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion Lumos (1)
Liquid Chromatography MS -neg - hilic (1)
Liquid Chromatography MS – pos - hilic (1)
Liquid Chromatography MS - alternating – hilic (1)
Capillary electrophoresis MS - negative (1)
Direct infusion MS - negative (1)
Capillary electrophoresis MS - positive (1)
Matrix-assisted laser desorption-ionisation imaging MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - negative - direct infusion (1)
Liquid Chromatography MS - positive - direct infusion (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Xevo G2 QTOF (Waters) (1)

Publication Date

2022 (35)
2021 (29)
2023 (26)
2020 (23)
2025 (23)
2014 (17)
2019 (16)
2024 (15)
2018 (11)
2015 (9)
2026 (6)
2016 (6)
2017 (5)
2013 (4)
2012 (3)
2011 (3)
2010 (3)
2009 (1)
2006 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
A0JLT2 (3)
A0JNW5 (3)
A0MZ66 (3)
A0PJW6 (3)
A0PK00 (3)
A1A4S6 (3)
A1L0T0 (3)
A1L170 (3)
A1L390 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:16704 (15)
CHEBI:15354 (15)
CHEBI:17368 (15)
CHEBI:32816 (13)
CHEBI:30769 (13)
CHEBI:16708 (12)
CHEBI:16335 (12)
CHEBI:17509 (12)
CHEBI:15891 (12)
CHEBI:16919 (12)
CHEBI:27897 (12)
CHEBI:16828 (12)
CHEBI:17568 (11)
CHEBI:55328 (11)
CHEBI:16359 (11)
CHEBI:17405 (11)
CHEBI:16737 (11)
CHEBI:17596 (11)
CHEBI:46961 (10)
CHEBI:18237 (10)
CHEBI:18186 (10)
CHEBI:16750 (10)
CHEBI:28044 (10)
CHEBI:7916 (10)
CHEBI:17750 (10)
CHEBI:24813 (10)
CHEBI:34900 (10)
CHEBI:17895 (10)
CHEBI:17295 (10)
CHEBI:28865 (10)

Metabolite Name

Adenosine (9)
4-Pyridoxic acid (8)
Taurine (8)
Taurocholic acid (8)
Uric acid (8)
Creatine (8)
Hypoxanthine (8)
L-Arginine (7)
Choline (7)
Guanine (7)
Riboflavin (7)
L-Tryptophan (7)
Thymidine (7)
Uracil (6)
Kynurenic acid (6)
Phytosphingosine (6)
L-Histidine (6)
Cytosine (6)
Adenine (6)
Guanosine (6)
Uridine (6)
Creatinine (6)
Inosine (6)
21-Deoxycortisol (5)
LysoPE(0:0/20:5(5Z,8Z,11Z,14Z,17Z)) (5)
LysoPE(20:3(11Z,14Z,17Z)/0:0) (5)
Leucine (5)
Valine (5)
Betaine (5)
Myristoleic acid (5)

First Public Date

2018 (1)

Study type

RNA-seq of coding RNA (15)
Transcription profiling by array (10)
Methylation profiling by high throughput sequencing (7)
ChIP-seq (5)
Comparative genomic hybridization by array (3)
RNA-seq of non coding RNA (3)
Other (1)
RNA-seq of total RNA (1)

Release Date

2025 (1210)
2022 (1094)
2023 (1055)
2024 (1004)
2021 (828)
2020 (601)
2019 (381)
2018 (301)
2017 (251)
2016 (236)
2026 (165)
2015 (161)
2014 (121)
2013 (73)
2012 (65)
2011 (36)
2010 (23)
2009 (11)
2008 (7)
2006 (5)
2005 (5)
2007 (3)
2004 (2)
2002 (1)
2001 (1)

Lab affiliation

Affiliated Eye Hospital of Shandong University of Traditional Chinese Medicine (5)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (2)
Central South University (2)
Crown Bioscience (2)
ETH Zurich (2)
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences (2)
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (2)
SJTU (2)
Shanghai Center for Systems Biomedicine Shanghai Jiao Tong University (2)
Shanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China (2)
Shanghai Institute of Thoracic Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai 200030 (2)
Bio-X Institutes, Key Laboratory for the Genetics of Development and Neuropsychiatric Disorders (Ministry of Education), Shanghai Key Laboratory of Psychotic Disorders, and Brain Science and Technology Research Center, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China. (1)
Brigham Young University (1)
China State Institute of Pharmaceutical Industry (1)
College of Marine Life Sciences, Ocean University of China, Qingdao, China (1)
College of Veterinary Medicine, Northwest A&F University, Yangling, Shaanxi 712100, P.R. (1)
Department of Anesthesiology, Xiangya Hospital, Central South University, Changsha, China (1)
Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Switzerland Faculty of Science, University of Zurich, Switzerland (1)
Department of Biotherapy, State Key Laboratory of Biotherapy and Cancer Center, West China Hospital, and West China School of Basic Medical Sciences & Forensic Medicine, Sichuan University, and Collaborative Innovation Center for Biotherapy, Chengdu 610041, P.R. China (1)
Department of Burns and Reconstructive Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, P.R. China. (1)
Department of Cellular and Molecular Pharmacology, University of California San Francisco, USA (1)
Department of Hepatobiliary Surgery, Nanfang Hospital, Southern Medical University, Guangzhou, China (1)
Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University; Key Laboratory of Carcinogenesis and Cancer Invasion of Ministry of Education, Key Laboratory of Medical Epigenetics and Metabolism, Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China (1)
Department of Pediatric Pulmonology and Immunology, West China Second University Hospital, Sichuan University, Chengdu, China (1)
Department of orthopaedics, the First Affiliated Hopital of Soochow University, Suzhou, China 215006 (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
First Affiliated Hospital, School of Medicine, Zhejiang University (1)
Frontier Science Center for Immunology and Metabolism, Medical Research Institute, Wuhan University, Wuhan, Hubei 430071, China (1)
GIBH (1)
Harold C. Simmons Comprehensive Cancer Center, UT Southwestern Medical Center, Dallas, TX, USA (1)

Tags

xref:PubMed:23747202 (1)
xref:PubMed:30457566 (1)
xref:PubMed:32055844 (1)
xref:PubMed:34412677 (1)
xref:PubMed:31903125 (1)

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Diagnostic Potential of Plasma IgG N-glycans in Discriminating Thyroid Cancer from Benign Thyroid Nodules and Healthy Controls

BACKGROUND: Novel biomarkers are urgently needed to distinguish between benign and malignant thyroid nodules and detect thyroid cancer in the early stage. The associations between serum IgG N-glycosylation and thyroid cancer risk have been revealed. We aimed to explore the potent...

2021-09-01 | MTBLS2935 | MetaboLights

An Esterase-Responsive SLC7A11 shRNA Delivery System Induced Ferroptosis and Suppressed Hepatocellular Carcinoma Progression.

Not available

S-EPMC10891814 | biostudies-literature

The complete chloroplast genome of Epimedium qingchengshanense G. Y. Zhong et B. L. Guo (Berberidaceae), an endangered species endemic to China.

Not available

S-EPMC7748797 | biostudies-literature

Comprehensive mutation screening for 10 genes in Chinese patients suffering very early onset inflammatory bowel disease.

Not available

S-EPMC4917618 | biostudies-literature

Enrichment of H3K9me2 on unsynapsed chromatin in C. elegans does not target de novo sites [ChIP-Seq]

Characterization of the H3K9me2 distribution in the C. elegans adult hermaphrodite genome using ChIP-Seq Examination of H3K9me2 in two different nematode strains: fer-1 control and fer-1;him-8 mutant, where the X chromosomes are unsynapsed. The fer-1 mutation prevents production of embryos.

ORGANISM(S): Caenorhabditis elegans

2015-09-04 | E-GEOD-67028 | biostudies-arrayexpress

Exploring the potential mechanisms of anti-pulmonary fibrosis effects of Luo Han Guo via network pharmacology, molecular docking, and experimental validation.

Not available

S-EPMC12638836 | biostudies-literature

Activation of ROS/MAPKs/NF-κB/NLRP3 and inhibition of efferocytosis in osteoclast-mediated diabetic osteoporosis.

Not available

S-EPMC6902677 | biostudies-literature

The complete chloroplast genome of Epimedium enshiense B. L. Guo et Hsiao (Berberidaceae).

Not available

S-EPMC7782069 | biostudies-literature

Autofluorescence imaging endoscopy can distinguish non-erosive reflux disease from functional heartburn: A pilot study.