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ProteomicsXylem sap shotgun proteomics from Fe- and Mn-deficient and Mn-toxic tomato plants
The aim of this work was to study the effects of Fe and Mn deficiencies and Mn toxicity on the protein profile of the xylem sap of tomato (Solanum lycopersicum), with the aim of elucidating plant response mechanisms to these nutritional stresses. Tomato was chosen as a model plant because the tomato...
ORGANISM(S): Viridiplantae 
2017-11-30 | PXD007517 | Pride
Iron deficiency  mn deficiency  mn toxicity  shotgun proteomics  tomato  xylem sap 
ProteomicsRoot shotgun proteomics from Fe- and Mn-deficient and Mn-toxic tomato plants
The aim of this work was to study the effects of Fe and Mn deficiencies and Mn toxicity on the protein profile of the root of tomato (Solanum lycopersicum), with the aim of elucidating plant response mechanisms to these nutritional stresses. Tomato was chosen as a model plant because the tomato geno...
ORGANISM(S): Solanum lycopersicum 
2018-08-06 | PXD008326 | Pride
Iron deficiency  mn deficiency  mn toxicity  shotgun proteomics  tomato  root 
ProteomicsPU1 interactome in human monocyte derived dendritic cells
Human monocyte-derived DC were cultured at a density of 0.5x10E6 cells/ml in RPMI-1640 supplemented with 10% FCS, 1% Pen/Strep, 10 ng/ml GM-CSF and 10 ng/ml IL4. At day 7, they were stimulated or not with 500 ng/ml LPS. Cells were collected at day 10. Whole cell lystaes from 2x10E8 cells were used f...
ORGANISM(S): Homo Sapiens 
2018-11-30 | MSV000083175 | MassIVE
ProteomicsPU.1 interactome mouse bone marrow derived dendritic cells
Mouse bone marrow derived dendritic cells were generated by culturing bone marrow cells at a density of 0.5x10E6 cells/ml in RPMI-1640 supplemented with 5% FCS, 1% Pen/Strep, 5microM 2-mercaptoethanol, 20ng/ml GM-CSF. At day 7 dendritic cells were stimulated or not with 500 ng/ml LPS, and collected ...
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2018-11-30 | MSV000083176 | MassIVE
TranscriptomicsExpression data from CD71+ cells from the bone marrow of WT, CD70TG, IFNg-/- and CD70TG*IFNg-/- mice.
CD70TG mice are a model for sterile chronic immune activation and develop Anemia of Inflammation, which is dependent on the production of Ifng by effector CD4 and CD8 T cells. We used microarrays to identify Ifng-dependent differentially expressed genes that could account for the erythropoietic defe...
ORGANISM(S): Mus musculus 
2011-07-31 | E-GEOD-22656 | biostudies-arrayexpress
TranscriptomicsPhenotypic, genomic and functional characterization reveals no differences between CD138++ and CD138low subpopulations in multiple myeloma cell lines
Despite recent advances in the treatment of multiple myeloma (MM), it remains an incurable disease potentially due to the presence of resistant myeloma cancer stem cells (MM-CSC). Although the presence of clonogenic cells in MM was described more than 30 years ago, the phenotype of MM-CSC is still a...
ORGANISM(S): Homo sapiens 
2014-05-19 | E-GEOD-49482 | biostudies-arrayexpress
ProteomicsMass Spectometry Analysis of Inhibition of SOD2-mediated protein degradation
Peptide samples were analysed by a shot-gun approach as described recently (Stieglitz et al., 2022). Raw MS data were processed using Max Quant (version 2.0, Cox and Mann 2008), Perseus software (version 2.0.6.0)(Tyanova et al.,2016), and human entries of uniprot DB. Proteins were stated identified ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2024-03-15 | MSV000094325 | MassIVE
UnknownDepth of Response in Multiple Myeloma: A Pooled Analysis of Three PETHEMA/GEM Clinical Trials.
Not available
S-EPMC5568033 | biostudies-literature
TranscriptomicsDifferent propensity in hematopoietic differentiation potential among distinct human pluripotent stem cell lines
Lineage-specific differentiation potential varies among different human pluripotent stem cell (hPSC) lines. A stem cell bank may advice researchers on which hPSCs exhibit the highest differentiation potential for a certain lineage. In this study, we aimed at characterizing the hematopoietic differen...
ORGANISM(S): Homo sapiens 
2010-07-24 | E-GEOD-23091 | biostudies-arrayexpress
ProteomicsXylem sap shotgun proteomics from Mn-excess tomato plants
The aim of this work was to study the effects of Mn excess on the protein profile of the xylem sap of tomato (Solanum lycopersicum), with the aim of elucidating plant response mechanisms to these nutritional stresses. Tomato was chosen as a model plant because the tomato genome has been published an...
ORGANISM(S): Solanum lycopersicum 
2020-12-10 | PXD021973 | Pride
Tomato Shotgun proteomics Xylem sap Mn excess Proteome 
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