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ProteomicsDifferences in the abundance of auxin homeostasis proteins suggest a central role for in vitro tissue differentiation in Coffea arabica
Coffea arabica is one of the most important crops worldwide. In vitro culture is an alternative for achieving Coffea regeneration, propagation, conservation, genetic improvement, and genome editing. The aim of this work is to identify proteins involved in auxin homeostasis by isobaric tandem mass ta...
ORGANISM(S): Coffea arabica (Arabian coffee) 
2022-02-17 | PXD029928 | Pride
Lc-ms Tmt Coffea arabica 
ProteomicsAlternative oxidase (AOX) seems to play a key role in embryogenic competence acquisition in Carica papaya L. calli
Understanding the mechanisms that endow a somatic cell with the ability to differentiate into a somatic embryo, which could result in numerous biotechnological applications, is still a challenge. The objective of this work was to identify some of the molecular and physiological mechanisms responsibl...
ORGANISM(S): Carica papaya 
2022-06-28 | PXD026311 | Pride
Somatic embryos Label-free proteomics Hormones Mitochondrial proteomics 
UnknownGenome-wide analysis of cotton GH3 subfamily II reveals functional divergence in fiber development, hormone response and plant architecture.
Not available
S-EPMC6291927 | biostudies-literature
UnknownNatural variation in the transcription factor REPLUMLESS contributes to both disease resistance and plant growth in Arabidopsis.
Not available
S-EPMC9483108 | biostudies-literature
TranscriptomicsThe Genetic Network Controlling the Arabidopsis Transcriptional Response to Pseudomonas syringae pv. maculicola
Expression profiling of wild-type plants and mutants with defects in key components of the defense signaling network was used to model the Arabidopsis network 24 hours after infection by Pseudomonas syringae pv. maculicola strain Psm ES4326. Results using the Affymetrix ATH1 array revealed that expr...
ORGANISM(S): Arabidopsis thaliana 
2008-07-18 | E-GEOD-11009 | biostudies-arrayexpress
UnknownGenome-wide identification and transcriptional profiling analysis of auxin response-related gene families in cucumber.
Not available
S-EPMC4108051 | biostudies-literature
Unknown<i>GH3</i> Gene Family Identification in Chinese White Pear (<i>Pyrus bretschneideri</i>) and the Functional Analysis of <i>PbrGH3.5</i> in Fe Deficiency Responses in Tomato.
Not available
S-EPMC11641127 | biostudies-literature
TranscriptomicsTranscription profiling of Arabidopsis ARF6 and ARF8 mutants during flower development
The aim of this study was to examine the contribution of ARF6 and ARF8 to flower gene expression. Flowers from arf6 arf8 plants undergo a developmental arrest at approximately stage 12, just prior to flower opening. Flowers from wild-type, arf6/arf6 ARF8/arf8, and arf6 arf8 plants were separated int...
ORGANISM(S): Arabidopsis thaliana 
2007-06-28 | E-GEOD-2848 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis ARF6 and ARF8 mutants treated with indoleacetic acid (IAA)
The aim of this study was to examine the roles of Auxin Response Factors (ARFs) in flower gene expression. Flowers from arf6 arf8 plants undergo a developmental arrest at approximately stage 12, just prior to flower opening. Wild-type, ARF6/arf6 arf8/arf8, and arf6 arf8 plants were treated with 10 u...
ORGANISM(S): Arabidopsis thaliana 
2007-07-11 | E-GEOD-2847 | biostudies-arrayexpress
TranscriptomicsBulk RNA-seq for undifferentiated spermatogonia from the testes of control, aged and busulfan-treated C57BL/6 mice
Samples were prepared from 100 GFRa1-GFP positive, Miwi2-tdTom negative and 100 GFRa1-GFP negative, Miwi2-tdTom positive cells that were sorted with FACS. cDNA libraries were prepared with the SMARTseq2 protocol. Adult, control samples had four biological replicates while the aged and busulfan-trea...
ORGANISM(S): Mus musculus 
2022-02-28 | E-MTAB-9238 | biostudies-arrayexpress
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