Hao H H - OmicsDI

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Unknown (6627)
Proteomics (454)
Transcriptomics (169)
Metabolomics (56)
Genomics (28)
Models (6)
Other (2)
Genomic (1)
Multiomics (1)

Organisms

Homo sapiens (284)
Mus musculus (144)
Rattus norvegicus (18)
Escherichia coli (16)
Saccharomyces cerevisiae (15)
Arabidopsis thaliana (13)
Oryza sativa (9)
Gallus gallus (5)
cellular organisms (4)
Oryza sativa Japonica Group (4)
Plasmodium falciparum (3)
Candida albicans (3)
Caenorhabditis elegans (3)
Streptococcus suis 05ZYH33 (2)
Zea mays (2)
Drosophila melanogaster (2)
Danio rerio (2)
Malus domestica (2)
Chlamydomonas reinhardtii (1)
Rapana venosa (1)
Populus yunnanensis (1)
Hevea brasiliensis (1)
Deinococcus gobiensis (1)
Campylobacter (1)
Schistosoma japonicum (1)
Plasmodium knowlesi (1)
Cucumis sativus (1)
Panicum virgatum (1)
Escherichia coli BW25113 (1)
Columba livia (1)

Organisms

Oryza sativa (5)
Mus musculus (1)

Repository

pride (200)
biostudies-arrayexpress (183)
iProX (165)
PeptideAtlas (64)
MetaboLights (50)
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ENA (8)
EGA (6)
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Cell Collective (1)
dbGaP (1)

Tissue

Cell culture (66)
Liver (44)
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Others (3)
Blood (3)
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Heart (3)
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Plasma Non-glyco (2)
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Embryo (2)
Fruit body (2)
Gut (2)
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Brain (1)

Disease

Cervix carcinoma (4)
Colon cancer (3)
Disease free (3)
Pancreatic ductal adenocarcinoma (3)
Not Available (2)
Breast cancer (2)
Disease (2)
Lung cancer (2)
Prostate adenocarcinoma (2)
Wounds and Injuries (2)
Osteocytes/osteoblasts (1)
Normal (1)
Alcohol (1)
Beta thalassemia (1)
Brain glioblastoma multiforme (1)
Carcinoma (1)
Cardiovascular system disease (1)
Cholangiocarcinoma (1)
Hepatocellular carcinoma (1)
Hydrocephalus (1)
Influenza (1)
Kidney disease (1)
Leukemia (1)
Malignant neoplasm of ovary (1)
Obesity (1)
Ovarian carcinoma (1)

Technology Type

Mass Spectrometry (200)
Shotgun proteomics (111)
Mass spectrometry (36)
Bottom-up proteomics (28)
Data-dependent acquisition (16)
Affinity purification coupled with mass spectrometry proteomics (12)
Data-independent acquisition (12)
Mass spectrometry assay (9)
Gel-based experiment (8)
SWATH MS (8)
NMR spectroscopy (6)
Top-down proteomics (6)
SRM/MRM (4)
Affinity proteomics (3)
Illumina HiSeq 2000 (2)
All-ion fragmentation (2)
Mass spectrometry imaging (2)
Proteogenomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (21)
Liquid Chromatography MS - positive - reverse phase (21)
BGISEQ-500 (6)
6550 iFunnel Q-TOF LC/MS (5)
Q Exactive HF-X (5)
Orbitrap Fusion Lumos (5)
Q Exactive (4)
Bruker (4)
Liquid Chromatography MS - negative (4)
Liquid Chromatography MS - positive (4)
Liquid Chromatography MS - alternating - hilic (3)
Liquid Chromatography MS - alternating - reverse phase (3)
Liquid Chromatography MS - negative - hilic (3)
Illumina MiSeq (2)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
NextSeq 500 (2)
Q Exactive HF (2)
TripleTOF 6600 (2)
Instrument (2)
TripleTOF 5600 (2)
10X Chromium Controller (1)
Illumina NovaSeq X (1)
DNBSEQ-T7 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
MicrOTOF-Q II (1)
Q-Exactive H-FX (1)
Q-Exactive HFX (1)
TripleTOF 5600+ (1)

Publication Date

2025 (80)
2024 (72)
2022 (64)
2021 (64)
2023 (53)
2026 (37)
2020 (33)
2019 (29)
2015 (27)
2014 (27)
2012 (25)
2011 (24)
2013 (22)
2018 (21)
2016 (14)
2010 (14)
2017 (13)
2009 (6)
2008 (3)
2007 (3)
2004 (3)
2005 (2)
2006 (2)
2003 (1)
2027 (1)
2002 (1)
2001 (1)

UNIPROT ID/AC

P31327 (38)
B4E3A4 (35)
P60709 (35)
P63261 (35)
P25705 (34)
A5A3E0 (33)
P06576 (33)
Q9BYX7 (31)
P04264 (30)
P68032 (30)
P68133 (30)
I3L4N8 (29)
P00367 (29)
P07477 (29)
P62736 (29)
P63267 (29)
P69891 (29)
P69892 (29)
P35908 (28)
P68363 (28)
Q13707 (28)
O24646 (1)
P43254 (1)
Q8LGH4 (1)
Q9FFA7 (1)
Q9FN03 (1)
Q9LIE5 (1)
Q9LTJ6 (1)
Q9M086 (1)
Q9SYX2 (1)

ENSEMBL ID

ENSG00000170477 (5)
ENSG00000229353 (1)

CHEBI ID

CHEBI:30769 (15)
CHEBI:17368 (14)
CHEBI:16704 (13)
CHEBI:16919 (13)
CHEBI:17154 (13)
CHEBI:15891 (12)
CHEBI:17568 (12)
CHEBI:18012 (12)
CHEBI:15354 (11)
CHEBI:15756 (11)
CHEBI:16708 (11)
CHEBI:16737 (11)
CHEBI:16750 (11)
CHEBI:17596 (11)
CHEBI:25017 (11)
CHEBI:28300 (11)
CHEBI:78320 (11)
CHEBI:15428 (10)
CHEBI:16449 (10)
CHEBI:16610 (10)
CHEBI:17053 (10)
CHEBI:17191 (10)
CHEBI:17895 (10)
CHEBI:18186 (10)
CHEBI:24813 (10)
CHEBI:33699 (1)
CHEBI:36080 (1)
CHEBI:55474 (1)
CHEBI:56080 (1)
CHEBI:61448 (1)

Metabolite Name

Creatine (8)
Hypoxanthine (8)
Inosine (8)
Taurine (8)
Uridine (8)
Adenosine (7)
Creatinine (7)
Cytidine (7)
Guanine (7)
Guanosine (7)
Niacinamide (7)
Uracil (7)
Citric acid (6)
L-Arginine (6)
Naringenin (6)
Tyrosine (6)
Adenine (5)
Histidine (5)
L-Tryptophan (5)
L-Tyrosine (5)
Pantothenic acid (5)
Spermidine (5)
Suberic acid (5)
Taurocholic acid (5)
Xanthine (5)
Xanthosine (5)
1-methyladenosine (4)
4-Nitrophenol (4)
Acetylcarnitine (4)
Allantoin (4)

First Public Date

2014 (5)
2025 (1)
2020 (1)
2017 (1)

Modelling Approach

Ordinary differential equation model (3)
Constraint-based model (1)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (13)
Nanjing Med Univ, State Key Lab Reprod Med, Dept Histol & Embryol, 140 Hanzhong Rd, Nanjing 210029, Jiangsu, Peoples R China. (4)
Professor and Director Center of Proteomic Analysis BGI-Shenzhen (4)
Molecular Cell and Developmental Biology, School of Life Sciences, University of Dundee (3)
Shandong Provincial Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, China (3)
Tianjin Medical University Cancer Institute and Hospital (3)
College of Chemistry and Molecular Engineering, Peking University, Beijing, China. (2)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, 75390, TX, USA (2)
Department of Clinical Pharmacy, University of Michigan (2)
Department of Molecular Pharmacology and Therapeutics Columbia University Irving Medical Center (2)
Department of Neurological Surgery, Washington University in St. Louis School of Medicine (2)
Department of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (2)
Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (2)
Nanjing Med Univ, State Key Lab Reprod Med, Dept Histol & Embryol, 101 Longmian Rd, Jiangning District, Nanjing 211166, Jiangsu, China. (2)
Northeast Normal University (2)
SJTU (2)
School of Life Science and Technology ShanghaiTech University 100 Haike Road, Shanghai, China (2)
State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China (2)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (2)
State Key Laboratory of Reproductive Medicine and Offspring Health, Department of Histology and Embryology, Gusu School, Nanjing Medical University (2)
VIB Center for Medical Biotechnology, VIB, Ghent, B9052, Belgium Department of Biomolecular Medicine, Ghent University, Ghent, B9052, Belgium (2)
1Department of Neurosurgery, Yale School of Medicine, New Haven, CT, USA. Department of Neurosurgery, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA Broad Institute of Harvard and MIT, Cambridge, Massachusetts, USA (1)
Beihang University, Beijing, China (1)
Beijing Geriatric Healthcare and Disease Prevention Center, Xuanwu Hospital, Capital Medical University, Beijing, China. (1)
Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China (1)
Beijing University of Agriculture (1)
Biochemistry (1)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (1)
CAS Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (1)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China (1)

IsPrivate

False (5)

Model Flag

Non Kinetic (1)

Modification

-17.026549 (1)
0.984016 (1)
10.008269 (1)
15.994915 (1)
2x(15)N labeled L-lysine (1)
42.010565 (1)
45.029395 (1)
4x(15)N labeled L-arginine (1)
57.021464 (1)
6.020129 (1)

Study type

Transcription profiling by array (104)
RNA-seq of coding RNA (31)
Methylation profiling by array (8)
ChIP-seq (6)
DNA-seq (5)
RNA-seq of coding RNA from single cells (5)
ChIP-chip by tiling array (4)
Comparative genomic hybridization by array (4)
Other (4)
RNA-seq of non coding RNA (4)
Methylation profiling by high throughput sequencing (3)
Unknown experiment type (1)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
Bisulfite-seq (1)
Genotyping by high throughput sequencing (1)

Release Date

2025 (1050)
2022 (970)
2024 (826)
2023 (809)
2021 (612)
2020 (492)
2019 (354)
2018 (299)
2017 (272)
2016 (220)
2015 (191)
2026 (159)
2014 (134)
2013 (89)
2012 (85)
2011 (82)
2010 (56)
2008 (41)
2009 (34)
2007 (10)
2004 (6)
2006 (5)
2005 (5)
2002 (2)
1999 (2)
2003 (1)
2001 (1)
2000 (1)
1997 (1)

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Complete plastome sequence of Ardisia bullata G. H. Huang & G. Hao, an endemic species in Hainan.

Not available

S-EPMC7782065 | biostudies-literature

Proteomics analysis of Hypsizygus marmoreus

Hypsizygus marmoreus is one of the most popular industrialized cultivation mushrooms in East Asia. H. marmoreus is the third wildly cultivated industrialized cultivated mushroom in China now behind only Flammulina velutipes and Pleurotus eryngii. H. marmoreus is a low-temperature fruiting mushroom. ...

ORGANISM(S): Hypsizygus marmoreus

2020-12-14 | PXD017654 | Pride

Pan-Genomic and Transcriptomic Analyses of Marine Pseudoalteromonas agarivorans Hao 2018 Revealed Its Genomic and Metabolic Features.

Not available

S-EPMC9027991 | biostudies-literature

Streptococcus suis 05ZY: control vs contact with hBMEC 3 h

The interactions of Streptocococcus suis (S.suis) with human microvascular endothelial cells (hBMEC) are important process for S.suis passage across human blood brain barrier (BBB). S.suis has evolved precise mechanisms to alter gene expression depending on the distinct challenges posed by particula...

ORGANISM(S): Streptococcus suis 05ZYH33

2015-12-31 | E-GEOD-46962 | biostudies-arrayexpress

Streptococcus suis 05ZY: control vs contact with hBMEC 1 h

ORGANISM(S): Streptococcus suis 05ZYH33

2015-12-31 | E-GEOD-46961 | biostudies-arrayexpress

Crystal structures of human procathepsin H.

Not available

S-EPMC6059440 | biostudies-literature

The H-Pd···N-H metal-ligand dual-atom sites synergistically catalyzed alkyne semi-hydrogenation with complete Z-selectivity.

Not available

S-EPMC12932699 | biostudies-literature

Proteomic responses to varying temperatures in a calcareous green macroalga

Genus Halimeda is a worldwide distributed reef-building organism facilitated by fast growth and a rapid turnover rate in tropical and sub-tropical oceans. It is an excellent candidate for calcareous algae research because its calcification occurs extracellular, which deposits aragonite in the semi-e...

ORGANISM(S): Halimeda

2025-08-21 | PXD052097 | Pride

Proteomics Calcification Green macroalga Temperature

Conservation of the extended substrate specificity profiles among homologous granzymes across species

Granzymes are a family of structurally related serine proteases involved in immunity. To date four out of five human granzymes have been assigned orthologues in mice; however for granzyme H, no clear murine orthologue has been suggested and its role in cytotoxicity remains controversial. In this stu...

ORGANISM(S): Mus musculus (Mouse)

2013-11-27 | PXD000152 | Pride

Lc-msms N-terminal cofradic Granzyme h Granzyme c Human Mouse

Identification of a novel anthocyanin synthesis pathway in the fungus Aspergillus sydowii H-1.

Not available

S-EPMC6950803 | biostudies-literature

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7343 Results

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