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Transcriptomics (71)
Unknown (34)
Genomics (18)
Proteomics (2)
Metabolomics (1)

Organisms

Homo sapiens (43)
Mus musculus (27)
Rattus norvegicus (6)
Thermoanaerobacter sp. X514 (2)
environmental samples (2)
Drosophila melanogaster (2)
Hevea brasiliensis (1)
unidentified microorganism (1)
Aspergillus flavus (1)
Brucella melitensis (1)
mixed sample (1)
Caenorhabditis elegans (1)
Triticum aestivum (1)
Arabidopsis thaliana (1)

Repository

biostudies-arrayexpress (89)
pride (2)
MetaboLights (1)

Tissue

Breast (1)
Neuroblastoma cell (1)
Neuroblastoma cell line (1)

Disease

Squamous Cell Carcinoma (2)
Mammary tumor (2)
MFC II (1)
Mammary adenocarcinoma (pleural effusion) (1)
No local recurrence (1)
Triple negative breast cancer (1)
Breast cancer (1)
Neuroblastoma (1)

Technology Type

Mass Spectrometry (2)
Mass spectrometry (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Shotgun proteomics (1)

Instrument Platform

Illumina HiSeq 2500 (1)
Illumina NovaSeq 6000 (1)
Q Exactive (1)

Publication Date

2010 (14)
2014 (13)
2009 (13)
2011 (11)
2012 (10)
2008 (9)
2013 (6)
2007 (5)
2015 (4)
2020 (2)
2016 (2)
2025 (1)
2024 (1)
2021 (1)

CHEBI ID

CHEBI:111517 (1)
CHEBI:116314 (1)
CHEBI:11805 (1)
CHEBI:12937 (1)
CHEBI:12962 (1)
CHEBI:132477 (1)
CHEBI:132479 (1)
CHEBI:132948 (1)
CHEBI:132994 (1)
CHEBI:133005 (1)
CHEBI:133028 (1)
CHEBI:133032 (1)
CHEBI:133057 (1)
CHEBI:133066 (1)
CHEBI:133077 (1)
CHEBI:133092 (1)
CHEBI:133096 (1)
CHEBI:133115 (1)
CHEBI:133119 (1)
CHEBI:133139 (1)
CHEBI:133141 (1)
CHEBI:133144 (1)
CHEBI:133172 (1)
CHEBI:133176 (1)
CHEBI:133185 (1)
CHEBI:133186 (1)
CHEBI:133199 (1)
CHEBI:133435 (1)
CHEBI:133460 (1)
CHEBI:133469 (1)

Metabolite Name

(R)-3-hydroxybutyrylcarnitine (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPC (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4)* (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPC (P-16:0/18:2)* (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2)* (1)
1-(1-enyl-palmitoyl)-2-palmitoleoyl-GPC (P-16:0/16:1)* (1)
1-(1-enyl-palmitoyl)-2-palmitoyl-GPC (P-16:0/16:0)* (1)
1-(1-enyl-palmitoyl)-GPE (P-16:0)* (1)
1-(1-enyl-stearoyl)-GPE (P-18:0)* (1)
1-arachidonoyl-GPI (20:4)* (1)
1-lignoceroyl-GPC (24:0) (1)
1-linoleoyl-GPE (18:2)* (1)
1-linoleoyl-GPI (18:2)* (1)
1-methyl-4-imidazoleacetate (1)
1-methylguanidine (1)
1-methylhistidine (1)
1-methylnicotinamide (1)
1-myristoyl-2-palmitoyl-GPC (14:0/16:0) (1)
1-oleoyl-2-docosahexaenoyl-GPC (18:1/22:6)* (1)
1-oleoyl-2-linoleoyl-GPE (18:1/18:2)* (1)
1-oleoyl-GPI (18:1) (1)
1-palmitoyl-2-arachidonoyl-GPE (16:0/20:4)* (1)
1-palmitoyl-2-arachidonoyl-GPI (16:0/20:4)* (1)
1-palmitoyl-2-docosahexaenoyl-GPC (16:0/22:6) (1)
1-palmitoyl-2-docosahexaenoyl-GPE (16:0/22:6)* (1)
1-palmitoyl-2-linoleoyl-GPE (16:0/18:2) (1)
1-palmitoyl-2-oleoyl-GPC (16:0/18:1) (1)
1-palmitoyl-2-oleoyl-GPI (16:0/18:1)* (1)
1-palmitoyl-2-palmitoleoyl-GPC (16:0/16:1)* (1)
1-palmitoyl-2-stearoyl-GPC (16:0/18:0) (1)

Study type

Transcription profiling by array (52)
ChIP-seq (15)
RNA-seq of coding RNA (9)
Comparative genomic hybridization by array (4)
Methylation profiling by high throughput sequencing (3)
RNAi profiling by array (2)
Other (2)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2010 (14)
2014 (13)
2009 (13)
2011 (11)
2012 (10)
2008 (9)
2025 (8)
2013 (7)
2021 (6)
2016 (5)
2015 (5)
2007 (5)
2022 (5)
2023 (4)
2020 (2)
2019 (2)
2018 (2)
2024 (1)
2017 (1)

Lab affiliation

Department of Pediatric Hematology and Oncology, Charité - Universitätsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany (1)
Department of Pharmacology, University of North Carolina Chapel Hill School of Medicine, Chapel Hill, NC USA (1)

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Circulating U2 small nuclear RNA fragments as a novel diagnostic biomarker for pancreatic and colorectal adenocarcinoma

Global microRNA expression profiling of serum were collected using Agilent miRNA microarrays (G4471A Human, Amadid 29297, Sanger 14) carrying 887 individual human miRNA probes. Two different sources of RNA were analyzed: serum from NMRI-nu/nu mice carrying a xenograft tumor derived from human prima...

ORGANISM(S): Homo sapiens

2013-07-01 | E-GEOD-34052 | biostudies-arrayexpress

Optimal composition and position of histidine-containing tags improves biodistribution of ^99mTc-labeled DARPin G3.

Not available

S-EPMC6599047 | biostudies-literature

In Vivo Imaging of Hypoxia and Neoangiogenesis in Experimental Syngeneic Hepatocellular Carcinoma Tumor Model Using Positron Emission Tomography.

Not available

S-EPMC7428931 | biostudies-literature

Urban waterways microbial communities (GeoChip)

The increased urban pressures are often associated with specialization of microbial communities. Microbial communities being a critical player in the geochemical processes, makes it important to identify key environmental parameters that influence the community structure and its function.In this pro...

ORGANISM(S): environmental samples

2014-12-22 | E-GEOD-64286 | biostudies-arrayexpress

Antitumor Effect of Sclerostin against Osteosarcoma.

Not available

S-EPMC8656567 | biostudies-literature

shRNA profiling of human Colo16 cells knocked down for Downstreams of hnRNP A2

Limited knowledge of the downstream targets of hnRNP A2/B1 has, however, precluded a clear understanding of their roles in cancer cell growth. To define the pathways in which this protein acts we have now carried out microarray experiments with total RNA from Colo16 epithelial cells transfected with...

ORGANISM(S): Homo sapiens

2009-01-13 | E-GEOD-11865 | biostudies-arrayexpress

Novel Gene Expression Profile of Women with Intrinsic Skin Youthfulness by Whole Transcriptome Sequencing.

Not available

S-EPMC5102383 | biostudies-literature

Urban waterways microbial communities

This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

ORGANISM(S): mixed sample

2014-12-21 | E-GEOD-64376 | biostudies-arrayexpress

Profiling of serum oxylipins identifies distinct spectrums and potential biomarkers in young people with very early onset gout.

Not available

S-EPMC10152281 | biostudies-literature