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ProteomicsGenome-resolved metaproteomic characterization of preterm infant gut microbiota development reveals core metabolic functions and variability during early-life
An integrated metagenomics and metaproteomics investigation of human preterm infant gut microbiota.
ORGANISM(S): Gut Microbiota Of Human Preterm Infants 
2017-02-23 | MSV000080565 | MassIVE
ProteomicsBioremediation of a common product of food processing by a human gut bacterium
Bioremediation of a common product of food processing by a human gut bacterium
ORGANISM(S): Mus Musculus (ncbitaxon:10090) Microbiome 
2019-08-27 | MSV000084239 | MassIVE
ProteomicsC. thermocellum dHydG Acetate LC-MS/MS
Deletion of a hydrogenase maturation factor (HydG) knocks out the assembly of mature, functioning hydrogenases to divert metabolic flux away from hydrogen production and towards ethanol. Other system-wide affects assessed.
ORGANISM(S): Clostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8) 
2016-11-03 | PXD000777 | Pride
Lc-ms/ms Sulfur Hydrogenase g deletion Acetate Fermentation Thermocellum Bioethanol Clostridium 
ProteomicsMetaproteomics reveals persistent and phylum-redundant metabolic functional stability in adult human gut microbiomes despite temporal variations in microbial taxa, genomes, and proteomes
Longitudinal metaproteomics data set looking at the gut microbiome metaproteomes of fivepost-surgery Crohn's Disease patients for five time points over the course of a year.
ORGANISM(S): Human Microbiome 
2018-08-16 | MSV000082823 | MassIVE
ProteomicsMetaproteome of preterm infant gut microbiome
91 preterm infant gut metaproteomes measured in technical duplicate using an eleven salt pulse 2D-LC-MS/MS method. Samples represent 17 preterm infants over the first several weeks of life, of which 6 preterm infants eventually developed necrotizing enterocolitis.
ORGANISM(S): Microbiome 
MSV000086096 | MassIVE
ProteomicsMining waste streams of food production for bioactive plant polysaccharides that affect the fitness and expressed activities of targeted human gut microbes
Mining waste streams of food production for bioactive plant polysaccharides that affect the fitness and expressed activities of targeted human gut microbes
ORGANISM(S): Microbiota (ncbitaxon:13613) Mus Musculus (ncbitaxon:10090) 
2018-04-18 | MSV000082287 | MassIVE
TranscriptomicsCharacterization of anaerobic catabolism of p-coumarate in Rhodopseudomonas palustris
To address the question of how photosynthetic bacterium Rhodopseudomonas palustris metabolize lignin derived compound p-coumarate, transcriptomics and quantitative proteomics were combined to characterize gene expression profiles at both the mRNA level and protein level in Rhodopseudomonas palustris...
ORGANISM(S): Rhodopseudomonas palustris 
2008-05-07 | E-GEOD-6221 | biostudies-arrayexpress
MetabolomicsGNPS - Integrated omics analysis reveals metabolic adaptation of Clostridium thermocellum to lignocellulose-derived growth inhibitors released during the deconstruction of switchgrass
Integrated omics analysis reveals metabolic adaptation of Clostridium thermocellum to lignocellulose-derived growth inhibitors released during the deconstruction of switchgrass
ORGANISM(S): Hungateiclostridium Thermocellum (ncbitaxon:1515) 
MSV000080128 | GNPS
ProteomicsDetection and Characterization of Protein Methylation in Bacteriophages and Their Host, Cellulophaga baltica, During Infection
Bacteria and their viruses (bacteriophages or phages) are in a dynamic arms race that balances predation and resistance, each deploying various strategies, including protein post-translational modifications (PTMs), to achieve dominance. To better understand the role PTMs play in phage infection, we ...
ORGANISM(S): Cellulophaga Baltica (ncbitaxon:76594) Cellulophaga Baltica Phage Phi18:4 Cellulophaga Baltica Phage Phi18:1 Cellulophaga Baltica Phage Phi38:1 
2025-07-11 | MSV000098485 | MassIVE
ProteomicsMicrobiota functional activity biosensors
Microbiota functional activity biosensors in gnotobiotic mice
ORGANISM(S): Microbiota Mus Musculus 
2020-04-27 | MSV000085341 | MassIVE
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