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ProteomicsShared and specific targets of Arabidopsis immune MAPKs
In Arabidopsis, mitogen-activated protein kinases MPK3, MPK4 and MPK6 constitute essential relays for a variety of functions including cell division, development and innate immunity. While some substrates of MPK3, MPK4 and MPK6 have been identified, the picture is still far from complete. To identif...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2017-12-06 | PXD006807 | Pride
Arabidopsis thaliana Mapkinases Immunity Phosphoproteomics Signaling 
Transcriptomicsmutants-Transcriptomic analysis of mkk2 upon Cold stress
adt06-03-mkk2 - mutants - early response targets of MKK2 upon cold stress treatment and its role in adaptation. - Several mutants in MKK pathway were tested against the wild type. Keywords: gene knock out 12 dye-swap - CATMA arrays
ORGANISM(S): Arabidopsis thaliana 
2008-07-01 | E-GEOD-10764 | biostudies-arrayexpress
Transcriptomicsmkk2_mkk2_and_wrky19_cold_time_course-Transcriptomic analysis of mkk2 upon Cold stress
adt06-03-mkk2 - mkk2_mkk2_and_wrky19_cold_time_course - early response targets of MKK2 upon cold stress treatment and its role in adaptation. - seedlings were put to 4 ° comparing wild type ColO versus mkk2 knockouts, MKK2 overexpressors and wrky19 knockouts. Keywords: time course,wt vs mutant comp...
ORGANISM(S): Arabidopsis thaliana 
2008-06-30 | E-GEOD-10763 | biostudies-arrayexpress
ProteomicsPhosphoproteomics of Arabidopsis flg22 treated nuclear samples
To study the effect of microbe-associated molecular pattern (MAMP) treatment (flg22) on the phosphorylation of nuclear proteins, we treated Arabidopsis plants with flg22 and after isolation of nuclear proteins, we enriched for phosphopeptides and then carried out LC-MS/MS analyses. We used statistic...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-02-28 | PXD008403 | Pride
Arabidopsis Phosphoproteomics 
ProteomicsChromatin phosphoproteomics unravels a function for AT-hook motif nuclear localized protein AHL13 in PAMP-triggered immunity
Mitogen-activated protein kinases constitute essential signaling mechanisms linking external signal perception to gene expression in all eukaryotes. In Arabidopsis, MAPKs are found in the cytoplasmic and nuclear compartments, but no nuclear phosphoproteomic studies of mapk mutants were performed so ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2021-01-07 | PXD009823 | Pride
Arabidopsis thaliana Immune mapks Phosphoproteomics 
TranscriptomicsTranscription profiling of Arabidopsis wild type, 35S:mks1 and mpk4 plants
In plants, MAPKs are implicated in signalling cascades regulating immediate as well as systemic responses to pathogens. Arabidopsis MAP kinase 4 (MPK4) negatively regulates systemic acquired resistance (SAR) accompanied by the expression of pathogenesis-related (PR) genes. MPK4 interacts with and ph...
ORGANISM(S): Arabidopsis thaliana 
2005-09-01 | E-MEXP-173 | biostudies-arrayexpress
ProteomicsArabidopsis Coilin mutant LC-MS/MS
Determining the steady-state levels of proteins in the Arabiopsis coilin mutant plants
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2022-10-14 | PXD029502 | Pride
Coilin Dia Arabidopsis Lc-ms/ms 
TranscriptomicsTrancriptomic analysis in Salmonella typhimurium infection [invA_vs_14028s]
au10-06_salmonella_eduardob - inva_vs_14028s Transcriptomic analysis between Salmonella wt and different mutants in type3 secretion system. - Plants were grown during 14 days in solid medium and were transfered to liquid medium during 16 h. at 9 am samonella was added to a final concentration of OD6...
ORGANISM(S): Arabidopsis thaliana 
2012-01-31 | E-GEOD-34664 | biostudies-arrayexpress
Transcriptomicsmpk3 flg22 - Flagellin response in mpk mutants
au-09-01_mpk_flagellin_edu - mpk3 flg22 - Investigate flagellin mpk dependent genes - 2 weeks mpk3 plants treated 1 h with 1 microM flg22. Keywords: treated vs untreated comparison 2 dye-swap - CATMA arrays
ORGANISM(S): Arabidopsis thaliana 
2012-01-01 | E-GEOD-23188 | biostudies-arrayexpress
Transcriptomicssalmonella_14028s - Trancriptomic analysis in Salmonella typhimurium infection
au10-06_salmonella_eduardob - salmonella_14028s - Transcriptomic analysis between Salmonella wt and differents mutants in type3 secretion system - Plants were grown during 14 days in solid medium and were transfered to liquid medium during 16 h, at 9 am samonella was added to a final concentration o...
ORGANISM(S): Arabidopsis thaliana 
2012-01-01 | E-GEOD-23790 | biostudies-arrayexpress
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