Hl60 - OmicsDI

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synthetic construct (1)
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Disease

Acute leukemia (4)
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Technology Type

Mass Spectrometry (21)
Shotgun proteomics (13)
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Instrument Platform

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Liquid Chromatography MS - negative - reverse phase (1)

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2019 (4)
2016 (4)
2009 (3)
2007 (2)
2006 (2)

Metabolite Name

Trp-Arg-Lys (1)
Solasodine base + 2h, 2o, 1acetyl, o-hex-hex-hex-pen (1)
Ser-Met-Lys (1)
Resveratrol dimer (1)
Resveratrol 3-o-d-glucuronide (1)
Pyridoxine + o-hex (1)
Pro-cys (1)
O,o,s-triethyl phosphorothioate (1)
N6-methyladenine (1)
N(6)-oh-me-adenosine (1)
N-tris(hydroxymethyl)methylglycine (1)
N-phenylacetyl-l-prolylglycine ethyl ester (1)
N-dodecylamine (1)
N-(methylsulfonyl)-13-(3-pentyloxiranyl)-5z,8z,11z-tridecatrienamide (1)
N-(5z,8z,11z-eicosatrienoyl)ethanolamine (1)
Mundulone acetate (1)
Methanone, (4-chlorophenyl)[4-[[4-(4,5-dihydro-2-oxazolyl)phenyl]methylene]-1-piperidinyl]- (1)
L-n5-(1-imino-3-pentenyl)ornithine (1)
L-arginine-7-amido-4-methylcoumarin (1)
Ethanone, 1-[1-(4-fluorophenyl)-2,5-dimethyl-1h-pyrrol-3-yl]-2-(1-pyrrolidinyl)- (1)
Endo-borneol (1)
Dimethylaminopurine (1)
Desbenzyldonepezil (1)
Dendroamide c (1)
D-erythro-sphingosine c-20 (1)
Cyanidin-3-o-sambubioside-5-o-glucoside (1)
Cis,cis-9,12-octadecadien-1-ol (1)
Carbamic acid, n-(9h-xanthen-9-ylcarbonyl)-, butyl ester (1)
Betulinic acid methyl ester (1)
Benzeneethanamine, 2,5-dimethoxy-n-[(2-methoxyphenyl)methyl]-4-nitro- (1)

First Public Date

2014 (32)
2023 (19)
2018 (11)
2024 (10)
2022 (10)
2020 (9)
2013 (7)
2021 (6)
2019 (5)
2017 (5)
2025 (4)
2015 (4)
2026 (3)
2016 (1)

Modification

57.021464 (1)

Study type

Transcription profiling by array (63)
RNA-seq of coding RNA (14)
ChIP-seq (11)
Unknown experiment type (5)
ChIP-chip by tiling array (5)
Methylation profiling by high throughput sequencing (4)
Methylation profiling by array (3)
RNA-seq of non coding RNA (3)
Transcription profiling by SAGE (2)
Other (2)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
4C (1)
Comparative genomic hybridization by array (1)
Hi-C (1)
MicroRNA profiling by array (1)

Release Date

2022 (36)
2013 (31)
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2012 (30)
2017 (24)
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2014 (22)
2011 (22)
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2008 (13)
2009 (7)
2006 (5)
2026 (4)
2007 (4)
2005 (3)
2004 (2)
2003 (2)
2001 (2)
1998 (2)
2000 (1)
1999 (1)
1997 (1)

Lab affiliation

Department of Clinical and Molecular Medicine, Norwegian University of Science and Technology (NTNU), PO Box 8905, N-7491, Trondheim, Norway Phone: +47 72573075, Fax: +47 72576400 (2)
Emory University Center of Neurodegenerative Diseases Department of Biochemistry Emory Proteomics Core Facility (1)
Mass Spectrometry Research Center, Department of Biochemistry, Vanderbilt University (1)
1. SaBio, Instituto de Investigación en Recursos Cinegéticos IREC-CSIC-UCLM-JCCM, Ronda de Toledo s/n, 13005, Ciudad Real, Spain. 2. Biochemistry Section, Faculty of Science and Chemical Technologies, and Regional Centre for Biomedical Research (CRIB), University of Castilla-La Mancha, 13071, Ciudad Real, Spain. (1)
Department of Biochemistry, Mass Spectrometry Research Center, Vanderbilt University (1)
Department of Bioinformatics, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China (1)
Ghent University Department of Biochemistry B-9000 Ghent Belgium (1)
Proteome Exploration Laboratory, Beckman Institute, California Institute of Technology (1)
Professor of Biochemistry, Adjunct & Emerita Faculty N.T. Veatch Awardee for Distinguished Research & Creativity UMKC School of Science& Engineering, Biological & Biomedical Systems, Kansas City, MO, USA (1)
Laboratory of systems biology,Institute of biomedical chemistry (IBMC), Moscow, Russia (1)
Laboratoire de Spectrométrie de Masse Bio-Organique (LSMBO), Institut Pluridisciplinaire Hubert Curien (IPHC), UMR 7178, Université de Strasbourg, CNRS, Strasbourg, France (1)
Proteomic Hematology Division of Molecular Hematology Lund Stem Cell Center, Lund University (1)
VIB-UGent Center for Medical Biotechnology, VIB, Belgium Department of Biomolecular Medicine, Ghent University, Belgium (1)
CEA, DMTS, SPI, Li2D (1)
Max Planck Institute for Molecular Biomedicine Bioanalytical Mass Spectrometry Röntgenstr. 20 48149 Münster Germany (1)
Department of Proteomic Research and Mass Spectrometry, Laboratory of Systems Biology, IBMC, Moscow, Russia (1)
Cellzome, a GSK company (1)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (1)
Molecular Oncology Moffitt Cancer Center Tampa, FL, USA (1)
Indiana University School of Medicine (1)

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Transcription profiling by array of human HL60 cells treated with eicosapantaenoic acid (EPA) to investigate the effect on the signalling pathways involved in growth arrest/apoptosis

We investigated the effect of EPA on the signalling pathways involved in growth arrest/apoptosis in HL60 cells. EPA inhibited cell proliferation in HL60 cells in a dose dependent manner. Gene expression profiling of HL60 cells treated with EPA was performed by Affymetrix GeneChip. System and key mar...

ORGANISM(S): Homo sapiens

2008-11-11 | E-MEXP-1389 | biostudies-arrayexpress

c-Myc binding in HL60 cells

Analysis of technical variance of ChIP-on-Chip studies by characterization of Myc-binding in HL60 cells. Keywords: Chip-on-chip Characterization of c-Myc binding in HL60 cells. Thirteen biologically independent replicates of growing HL60 cells were subjected to ChIP with an N-terminal c-Myc antibod...

ORGANISM(S): Homo sapiens

2010-05-17 | E-GEOD-8447 | biostudies-arrayexpress

Identification of differentially expressed genes upon treatment with Eltrombopag in HL60 cells

Identification of differentially expressed genes upon treatment with Eltrombopag in HL60 cells. HL60 cells were untreated, or treated with 3ug/ml of Eltrombopag for 36 hrs in RPMI with 10% FBS HL60 cells were untreated, or treated with 3ug/ml of Eltrombopag for 36 hrs in RPMI with 10% FBS

ORGANISM(S): Homo sapiens

2012-06-24 | E-GEOD-37580 | biostudies-arrayexpress

Effects of gene scilencing of USP2 on expression profiles of HL60 cells

So far, we have found PMA induced USP2b isoform in myeloid leukemia cell lines such as HL60, THP-1, and U937. To explore molecular function of USP2 in the cells, we assess expression profiles of HL60-derivatives continuously expressing shRNA for USP2 and control shRNA. HL60 derivatives continuously ...

ORGANISM(S): Homo sapiens

2013-08-27 | E-GEOD-20476 | biostudies-arrayexpress

Gene expression analysis of human microRNA-150 expression in PL21 and HL60 cells

Analysis of gene expression changes associated with lentiviral vector mediated expression of pre-microRNA-150 expression in the AML cell lines PL21 and HL60 cells. To identify genes, direct putative miRNA-150 targets, biological and molecular functions and pathways that distinguish cells that expre...

ORGANISM(S): Homo sapiens

2013-01-15 | E-GEOD-40147 | biostudies-arrayexpress

Hi-C detects novel rearrangements in HL60 and HL60/S4 cell lines

PRJNA494631 | ENA

Transcription profiling of human HL60 cells +/- treninoin

This study compared the expression signatures of HL60 cells +/- tretinoin. This data was then used for another study showing a method for high-throughput gene expression signature analysis. Experiment Overall Design: The experiment consists of 3 HL60 samples treated with DMSO and 3 HL60 samples tre...

ORGANISM(S): Homo sapiens

2008-06-13 | E-GEOD-5007 | biostudies-arrayexpress

Characterization of technical variation in ChIP-on-chip studies

Analysis of technical variance of ChIP-on-Chip studies by characterization of Myc-binding in HL60 cells. Keywords: Chip-on-chip Fully-blocked study of technical variance in Myc-binding in HL60 cells. Two different antibodies were used to generate 6 biologically independent replicates each. Each repl...

ORGANISM(S): Homo sapiens

2008-10-31 | E-GEOD-8448 | biostudies-arrayexpress

Methylation profiling by array of human HCT116 and HL60 cells treated with the demthylating drugs azacytidine and decitabine

Array-based analysis of genome-wide DNA methylation changes induced by the demethylating drugs azacytidine and decitabine on HCT116 and HL60 cells for 24 hours

ORGANISM(S): Homo sapiens

2010-12-01 | E-MTAB-417 | biostudies-arrayexpress

Transcriptomics of HL60 cell line at 30 min and 1 h after all-trans-retinoic acid (ATRA) treatment

Transcriptome profiling of HL60 cells at the yearly time points of ATRA treatment (30 min and 1 h) allows to unveil molecular mechanisms of the onset of granulocytic maturation. Transcriptomic techniques are characterized by high sensitivity and allow for detection of low-abundant molecules, such as...

ORGANISM(S): Homo sapiens

2022-10-01 | E-MTAB-12026 | biostudies-arrayexpress

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