Holmes J W JW - OmicsDI

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Unknown (153)
Metabolomics (1)
Proteomics (1)

Organisms

Nitrosopumilus maritimus SCM1 (1)

Repository

MetaboLights (1)
pride (1)

Tissue

Cell culture (1)

Technology Type

Mass spectrometry (1)
Mass Spectrometry (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2024 (1)
2017 (1)

CHEBI ID

CHEBI:10023 (1)
CHEBI:10028 (1)
CHEBI:10029 (1)
CHEBI:10037 (1)
CHEBI:10089 (1)
CHEBI:10095 (1)
CHEBI:10106 (1)
CHEBI:10112 (1)
CHEBI:10117 (1)
CHEBI:10119 (1)
CHEBI:10121 (1)
CHEBI:10135 (1)
CHEBI:10137 (1)
CHEBI:1014 (1)
CHEBI:10214 (1)
CHEBI:102216 (1)
CHEBI:102484 (1)
CHEBI:102524 (1)
CHEBI:10276 (1)
CHEBI:10319 (1)
CHEBI:111173 (1)
CHEBI:113 (1)
CHEBI:113543 (1)
CHEBI:116915 (1)
CHEBI:1191 (1)
CHEBI:125201 (1)
CHEBI:125451 (1)
CHEBI:125472 (1)
CHEBI:1263 (1)
CHEBI:131168 (1)

Metabolite Name

(+)-10-deoxymethynolide (1)
(+)-castanospermine (1)
(+)-syringaresinol (1)
(+/-)-abscisic acid (1)
(+/-)-camphor (1)
(+/-)-camphoric acid (1)
(+/-)12(13)-dihome (1)
(+/-)19(20)-dihdpa (1)
(+/-)8(9)-dihet ((8R,9R)-DHET) (1)
(+/-)9(10)-epome (1)
(+/-)9,10-dihydroxy-12z-octadecenoic acid (1)
(+/-)9-hpode (1)
(-)-andrographolide (1)
(10s)-juvenile hormone iii diol (1)
(11s,12e,14z)-11-hydroxy-12,14-icosadienoic acid (1)
(14r)-3beta,5,6beta,10,16-pentahydroxygrayanotoxan-14-yl acetate (1)
(17beta)-4-(acetylsulfanyl)-3-oxoandrost-4-en-17-yl propionate (1)
(1r,2r,6s,7s,8r,10s,11s,12r,16r,18r)-6,7-dihydroxy-8-(hydroxymethyl)-16-isopropenyl-4,18-dimethyl-14-nonyl-9,13,15,19-tetraoxahexacyclo[12.4.1.0~1,11~.0~2,6~.0~8,10~.0~12,16~]nonadec-3-en-5-one (1)
(1s,3z)-4-methylene-3-[(2e)-2-{(1r,3as,7ar)-7a-methyl-1-[(2r)-7,7,7-trifluoro-6-hydroxy-2-heptanyl]octahydro-4h-inden-4-ylidene}ethylidene]cyclohexanol (1)
(20z)-17-oxo-20-hexacosenoic acid (1)
(25s)-5beta-spirostan-3beta-yl beta-d-glucoside (1)
(2e)-3-[4-(sulfooxy)phenyl]acrylic acid (1)
(2e)-4-{3-[2-(2,4-dihydroxyphenyl)-2-oxoethyl]-4,6-dihydroxy-2-methoxyphenyl}-2-methyl-2-buten-1-yl hydrogen sulfate (1)
(2r)-2,3-dihydroxypropanoic acid (1)
(2r)-2-beta-gdimboa (1)
(2r)-3-{[(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(octanoyloxy)propyl octanoate (1)
(3a,5b,7a,12a)-24-[(carboxymethyl)amino]-1,12-dihydroxy-24-oxocholan-3-yl-b-d-glucopyranosiduronic acid (1)
(3alpha,5beta,7alpha,12alpha,23e)-3,7,12-trihydroxyergost-23-en-26-oic acid (1)
(3alpha,5beta,7alpha,8xi,9xi,12alpha,14xi,25r)-7-(beta-d-galactopyranosyloxy)-3,12-dihydroxycholestan-27-yl acetate (1)
(5-benzyl-3,6-dioxo-2-piperazinyl)acetic acid (1)

Release Date

2020 (25)
2022 (22)
2021 (22)
2023 (12)
2016 (10)
2024 (9)
2025 (8)
2015 (8)
2013 (6)
2012 (6)
2014 (5)
2019 (4)
2017 (4)
2009 (4)
2026 (3)
2018 (2)
2008 (2)
2010 (1)

Lab affiliation

University of Washington (1)

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Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations

High representation by ammonia-oxidizing archaea (AOA) in marine systems is consistent with their high affinity for ammonia, efficient carbon fixation, and copper (Cu)-centric respiratory system. However, little is known about their response to nutrient stress. We therefore used global transcripti...

ORGANISM(S): Nitrosopumilus maritimus SCM1

2017-10-27 | PXD007728 | Pride

Marine ammonia oxidizing archaea Nitrosopumilus maritimus (strain scm1)

Abnormal muscle mechanosignaling triggers cardiomyopathy in mice with Marfan syndrome.

Not available

S-EPMC3934180 | biostudies-literature

Transcriptomic and metabolomic analysis of liver cirrhosis

Liver cirrhosis is one of the leading causes of decreased life expectancy worldwide. However, the molecular mechanisms underlying the development of liver cirrhosis remain unclear. In this study, we performed a comprehensive analysis using transcriptome and metabolome sequencing to explore the genes...

2024-08-07 | MTBLS5665 | MetaboLights

Microcirculatory perfusion disturbances in septic shock: results from the ProCESS trial.

Not available

S-EPMC6245723 | biostudies-literature

Efficacy and Safety of the mRNA-1273 SARS-CoV-2 Vaccine.

Not available

S-EPMC7787219 | biostudies-literature

Pathogenicity, tissue tropism and potential vertical transmission of SARSr-CoV-2 in Malayan pangolins.

Not available

S-EPMC10228812 | biostudies-literature

Recurrent Rare Genomic Copy Number Variants and Bicuspid Aortic Valve Are Enriched in Early Onset Thoracic Aortic Aneurysms and Dissections.

Not available