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ProteomicsMDR K. penumoniae, A. baumannii, E. coli, and P. aeruginiosa SWATH
This study elucidates the whole proteome changes in the MDR isolates of K. penumoniae, A. baumannii, E. coli, and P. aeruginiosa in the presence of Ampicillin, Kanamycin, and Nalidixic acid. Label-free SWATH-MS is used for protein quantitation of antibiotics treated and untreated samples.
ORGANISM(S): Klebsiella pneumoniae Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 Klebsiella pneumoniae ATCC BAA-2146 Bacteria 
2023-07-26 | PXD039154 | Pride
Swath Mdr K. pneumoniae A. baumannii 
TranscriptomicsMEF-mKras-WT1
K-ras is one of the most frequently mutated human oncogenes. Activation of K-ras can lead to either senescence or proliferation in primary cells. The precise mechanism governing these distinct outcomes remains unclear. Here we utilized a loss-of-function screen to assess the role of specific genes ...
ORGANISM(S): Mus musculus 
2010-03-06 | E-GEOD-15325 | biostudies-arrayexpress
TranscriptomicsTwo transcription factors are necessary for iron homeostasis in a salt-dwelling archaeon [ChIP-chip data]
Because iron toxicity and deficiency are equally life threatening, maintaining intracellular iron levels within a narrow optimal range is critical for nearly all known organisms. However, regulatory mechanisms that establish homeostasis are not well understood in organisms that dwell in environments...
ORGANISM(S): Halobacterium sp. NRC-1 
2011-06-02 | E-GEOD-29705 | biostudies-arrayexpress
TranscriptomicsRNA-seq of human skin lesions diagnosed as actinic keratosis, intraepidermal carcinoma or squamous cell carcinoma
We report whole tissue RNA-seq data captured from 25 AK, IEC or SCC lesions obtained from the skin of 17 individuals. We used RNA-seq to detect and measure HPV E7 transcription.
ORGANISM(S): Homo sapiens 
2018-07-09 | E-MTAB-6430 | biostudies-arrayexpress
MetabolomicsA large-scale metabolomics study to harness chemical diversity and explore biochemical mechanisms in ryegrass (UPLC-MS HILIC POS assay)
Perennial ryegrass (Lolium perenne) is integral to temperate pastoral agriculture, which contributes most of the milk and meat production worldwide. Chemical profiles and diversity of ryegrass offer several opportunities to harness specific traits and elucidate underlying biological mechanism...
2019-03-01 | MTBLS62 | MetaboLights
UnknownA photobioreactor for production of algae biomass from gaseous emissions of an animal house.
Not available
S-EPMC10656320 | biostudies-literature
TranscriptomicsTranscription profiling by array of Transcriptional profiling of serogroup B Neisseria meningitidis growing in human blood: an approach to vaccine antigen discovery.
Neisseria meningitidis is a nasopharyngeal commensal of humans which occasionally invades the blood to cause septicaemia. The transcriptome of N. meningitidis strain MC58 grown in human blood for up to 4 hours was determined and around 10% of the genome was found to be differentially regulated. The ...
ORGANISM(S): Neisseria meningitidis 
2012-11-06 | E-BUGS-121 | biostudies-arrayexpress
TranscriptomicsControl vs Diabetic mice skeletal muscle miRNA microarray
To extract the differentially expressed miRNA between control vs diabetic mice skeletal muscle. We used obese diabetic (C57BL/KsJ db/db) and normal control (C57BL/KsJ db+) mice, which were obtained from the Animal House Facility of the Central Drug Research Institute (CSIR), Lucknow, India.
ORGANISM(S): Mus musculus 
2013-04-22 | E-GEOD-32376 | biostudies-arrayexpress
UnknownCD2 Regulates Pathogenesis of Asthma Induced by House Dust Mice Extract.
Not available
S-EPMC7235426 | biostudies-literature
ProteomicsThe dopamine transporter antiports potassium to increase the uptake of dopamine
The dopamine transporter facilitates dopamine reuptake from the extracellular space to terminate neurotransmission. The transporter belongs to the neurotransmitter:sodium symporter family, which includes transporters for serotonin, norepinephrine, and GABA that utilize the Na+ gradient to drive the ...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2022-05-20 | PXD032663 | Pride
Ms  membrane proteins  mass spectroemetry  hydrogen-deuterium exchange  transporter 
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