Imprinting - OmicsDI

Show results for

Unknown (2650)
Genomics (1071)
Transcriptomics (553)
Methylation profiling (174)
Other (37)
Proteomics (27)
Genomic (6)
Metabolomics (4)
Clinical (2)
Models (1)

Organisms

Mus musculus (523)
Homo sapiens (267)
Arabidopsis thaliana (57)
Zea mays (21)
Rattus norvegicus (19)
Oryza sativa (15)
Sus scrofa (13)
Macaca mulatta (10)
Drosophila melanogaster (6)
Macaca fascicularis (6)
Bos taurus (6)
Bos indicus x Bos taurus (5)
Apis mellifera (3)
Gallus gallus (3)
Macaca fascicularis x Macaca mulatta (3)
Saccharomyces cerevisiae (3)
synthetic construct (3)
Caenorhabditis elegans (2)
Bos indicus (2)
Danio rerio (2)
Marchantia polymorpha (2)
Mus musculus domesticus x M. m. molossinus (1)
Equus asinus (1)
Gorilla gorilla gorilla (1)
Bombyx mori (1)
Arabidopsis lyrata (1)
Oryzias latipes (1)
Pan troglodytes (1)
Salmo salar (1)
Escherichia coli (1)

Organisms

Mus musculus (392)
Homo sapiens (176)
Arabidopsis thaliana (35)
Oryza sativa (14)
Sus scrofa (11)
Zea mays (11)
Rattus norvegicus (10)
Macaca mulatta (6)
Gallus gallus (6)
Bos taurus (5)
Bos indicus x Bos taurus (4)
Macaca fascicularis x Macaca mulatta (3)
Macaca fascicularis (3)
Apis mellifera (3)
Saccharomyces cerevisiae (3)
Trichosurus vulpecula (2)
Marchantia polymorpha (2)
Oryzias latipes (2)
Drosophila melanogaster (2)
Mus musculus domesticus x M. m. molossinus (1)
Nasonia vitripennis x Nasonia giraulti (1)
Poeciliopsis prolifica (1)
Kryptolebias marmoratus (1)
Rousettus aegyptiacus (1)
Nymphaea hybrid cultivar (1)
Caenorhabditis tropicalis (1)
Mus musculus x Rattus norvegicus (1)
Arabidopsis lyrata (1)
Xenopus (1)
Bombus terrestris (1)

Repository

ENA (880)
geo (713)
biostudies-arrayexpress (228)
pride (18)
EGA (15)
dbGaP (6)
MassIVE (5)
MetaboLights (4)
ExpressionAtlas (2)
BioModels (1)
iProX (1)

Tissue

B cell (4)
Cell culture (3)
Embryonic stem cell (3)
Leaf (3)
Early embryonic cell (2)
Endosperm (1)
Plant embryo (1)
Blood cell (1)
Blood plasma (1)
Blood serum (1)
Brain (1)
Embryo (1)
Eye epithelium (1)
Fruit (1)
Oocyte (1)
Plant cell (1)
T cell (1)

Disease

Disease free (3)
Malignant testicular germ cell tumor (1)
"hepatocellular adenoma" (1)
Raji Burkitt's lymphoma (1)
Cataract (1)
Lung Neoplasms (1)
Angelman syndrome (1)
Viral infectious disease (1)

Technology Type

Mass Spectrometry (18)
Shotgun proteomics (10)
Mass spectrometry (4)
Bottom-up proteomics (3)
Affinity purification coupled with mass spectrometry proteomics (2)
ILLUMINA, Illumina HiSeq 2000 (1)
ILLUMINA, RNAseq, Illumina HiSeq 2000, Illumina Human Methylation 450k BeadChip (1)
Illumina HiSeq 2000, ILLUMINA (1)
Illumina HiSeq 2000, NextSeq 500, ILLUMINA (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Illumina HiSeq 2000 (6)
NextSeq 500 (4)
Illumina NovaSeq 6000 (3)
Illumina HiSeq 4000 (3)
Illumina HiSeq 2500 (2)
Q Exactive (2)
ScanArray 4000 [PerkinElmer] (1)
GenePix 4000B [Axon Instruments] (1)
Illumina Genome Analyzer II (1)
Illumina HiSeq 1000 (1)
Illumina MiSeq (1)
LTQ Orbitrap Velos (1)
Orbitrap Exploris 480 (1)
Q-Exactive( Thermo fisher) (1)
6490 Triple Quadrupole LC/MS (Agilent) (1)
Acquity UPLC - 6530 QToF (1)
Liquid Chromatography MS - alternating - hilic (1)
Xevo TQ MS (1)

Publication Date

2024 (87)
2013 (77)
2026 (68)
2025 (64)
2023 (57)
2016 (57)
2019 (56)
2015 (56)
2022 (54)
2021 (54)
2012 (48)
2014 (47)
2017 (42)
2018 (41)
2020 (38)
2011 (33)
2010 (31)
2008 (30)
2009 (15)
2007 (9)
2005 (3)
2004 (3)
2006 (2)

UNIPROT ID/AC

P01580 (1)
P97378 (1)
Q9JKD8 (1)

CHEBI ID

CHEBI:33699 (1)
CHEBI:107726 (1)
CHEBI:131459 (1)
CHEBI:131738 (1)
CHEBI:131739 (1)
CHEBI:131740 (1)
CHEBI:131741 (1)
CHEBI:131742 (1)
CHEBI:131924 (1)
CHEBI:131982 (1)
CHEBI:131983 (1)
CHEBI:131984 (1)
CHEBI:131985 (1)
CHEBI:131986 (1)
CHEBI:131987 (1)
CHEBI:131988 (1)
CHEBI:131989 (1)
CHEBI:131991 (1)
CHEBI:131993 (1)
CHEBI:132001 (1)
CHEBI:132002 (1)
CHEBI:132004 (1)
CHEBI:132006 (1)
CHEBI:132007 (1)
CHEBI:132009 (1)
CHEBI:132032 (1)
CHEBI:132033 (1)
CHEBI:132034 (1)
CHEBI:132035 (1)
CHEBI:132036 (1)

Metabolite Name

L-Alanine (2)
L-Asparagine (2)
L-Leucine (2)
Ornithine (2)
10-HDoHE (1)
11-HDoHE (1)
11-HETE (1)
12,13-DiHODE (1)
12,13-DiHOME (1)
12,13-EpOME (1)
12-HETE (1)
12S-HEPE (1)
12S-HHTrE (1)
13-HDoHE (1)
13-HODE (1)
13-KODE (1)
14,15-DiHETrE (1)
14-HDoHE (1)
15-HETE (1)
15S-HEPE (1)
15S-HETrE (1)
17,18-DiHETE (1)
19,20-DiHDPA (1)
19,20-EpDPE (1)
2,3-DPG (1)
2-Oxoadipic-acid (1)
2-Phospho-D-glycerate (1)
20-HDoHE (1)
3-Aminoisobutanoic acid (1)
3-phenyllactic-acid (1)

First Public Date

2024 (106)
2014 (101)
2026 (85)
2025 (78)
2023 (65)
2019 (61)
2021 (59)
2020 (59)
2022 (56)
2018 (49)
2017 (49)
2013 (46)
2015 (34)
2016 (30)
2012 (1)
2011 (1)

Modelling Approach

Ordinary differential equation model (1)

Study status

Recruiting (1)
Terminated (1)

Lab affiliation

Division of Genetic and Genomic Medicine, Department of Pediatrics, UPMC Children's Hospital of Pittsburgh, Pittsburgh, USA (3)
1Medical Research Council Metabolic Diseases Unit, Institute of Metabolic Science-Metabolic Research Laboratories, University of Cambridge, Cambridge, United Kingdom (1)
Babraham Institute, Cambridge, UK (1)
Department of Biology, University of Konstanz, Universitaetsstrasse 10, 78457 Konstanz, Germany (1)
Department of Chemical Engineering, University of Texas at Austin, Austin, TX 78712, USA Department of Molecular Biosciences, University of Texas at Austin, Austin, TX, USA Department of Biomedical Engineering, University of Texas at Austin, Austin, TX, USA (1)
Department of Chemical Science - University of Naples "Federico II" (1)
Department of Molecular Medicine, Medical School, University of Padua, Padua 35121, Italy (1)
Department of Molecular Neurosciences, Center for Brain 1099 Research, Medical University of Vienna, Vienna, Austria (1)
Dept. Proteomics and Signal Transduction Max Planck Institute of Biochemistry (1)
Director, Max-Planck-Institute for Biochemistry, Am Klopferspitz 18, Martinsried, Germany (1)
GlycoProteomics Laboratory Sao Paulo University (1)
I2BC, CNRS, Gif/Yvette, France (1)
Institute of Biodynamics and Biocomplexity (IBB) Department of Biology Faculty of Science Utrecht University Kruytbuilding N806 Padualaan 8, 3584 CH Utrecht The Netherlands (1)
Institute of Molecular Systems Biology, ETH Zurich Faculty of Science, University of Zurich (1)
Medical University of South Carolina College of Medicine Department of Microbiology and Immunology Acting Associate Professor, Department of Surgery, Department of Microbiology and Immunology Emory University School of Medicine Director Translational Research for Cutaneous Malignancies Winship Cancer Institute of Emory University (1)
Weizmann Institute of Science (1)

Keyword

4p-/Wolf-Hirschhorn Syndrome (1)
Autosomal recessive extra oral halitosis (1)
Batten Disease (1)
Behcet’s Disease (1)
CACNA1H mutation (1)
Chronic recurrent multifocal osteomyelitis (CRMO) (1)
Dimethylglycine dehydrogenase deficiency (1)
Hemophagocytic Lymphohistiocytosis (HLH) (1)
Hereditary Sensory and Autonomic Neuropathy (1)
Hypersomnia (1)
Intestinal Bromhidrosis Syndrome (1)
Jansen metaphyseal chondrodysplasia (1)
Marinesco-Sjogren Syndrome (1)
Mitochondrial aminoacyl-tRNA synthetases (Mt-aaRS Disorders) (1)
Mucolipidosis (1)
Mucolipidosis IV (1)
Neglected Diseases (1)
Nephropathic infantile cystinosis (1)
Ocular cystinosis (1)
Orphan Diseases (1)
Rare Disease Research (1)
Registries (1)
Shine Syndrome (1)
Spinal Bulbar Muscular Atrophy (SBMA) (1)
Uncommon Disease (1)
Undiagnosed (1)
Wiedermann-Steiner Syndrome (1)

IsPrivate

False (1)

Classification

viruses (1)
bacteria (1)

Modification

+3amu) (1)

Study type

Transcription profiling by array (90)
RNA-seq of coding RNA (42)
Methylation profiling by array (29)
Methylation profiling by high throughput sequencing (24)
ChIP-seq (14)
RNA-seq of non coding RNA (7)
DNA-seq (4)
Comparative genomic hybridization by array (3)
ChIP-chip by tiling array (2)
Genotyping by array (2)
Other (2)
RNA-seq of coding RNA from single cells (2)
Animal - One-color microarray (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Bisulfite-seq (1)
ATAC-seq (1)
Hi-C (1)
Genotyping by high throughput sequencing (1)
Observational (1)
Observational patient registry (1)

Release Date

2022 (242)
2021 (215)
2023 (192)
2025 (191)
2019 (178)
2024 (172)
2020 (159)
2015 (153)
2018 (151)
2017 (137)
2013 (136)
2014 (132)
2016 (127)
2012 (121)
2011 (95)
2010 (92)
2008 (74)
2009 (70)
2007 (50)
2006 (36)
2026 (31)
2005 (29)
2003 (20)
2000 (18)
2004 (13)
2002 (13)
2001 (13)
1999 (9)
1997 (5)
1998 (4)

Location

United States (2)
Australia (1)

Previous page
1 / 453
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 453
Next page

Sort by:

Relevance

Page size

Noncanonical Genomic Imprinting Effects In Offspring

We report genomic imprinting effects in the arcuate nucleus, dorsal raphe nucleus, liver and muscle of adult female mice Examination of allele-specific gene expression hybrid mice generated from reciprocal crosses of CastEiJ x C57BL/6J mice

ORGANISM(S): Mus musculus

2015-08-01 | E-GEOD-70484 | biostudies-arrayexpress

High resolution analysis of genomic imprinting in the embryonic and adult mouse brain AND Sex-specific imprinting in the mouse brain

Genomic imprinting results in the preferential expression of the paternal, or maternal allele of certain genes. We have performed a genome-wide characterization of imprinting in the mouse embryonic and adult brain using F1 hybrid mice generated from reciprocal crosses of CASTEiJ and C57BL/6J mice. ...

ORGANISM(S): Mus musculus

2010-07-08 | E-GEOD-22131 | biostudies-arrayexpress

Characterization of the Imprinting Signature of Mouse Embryo Fibroblasts by RNA Deep Sequencing

Mouse embryo fibroblasts (MEFs) closely resemble mouse embryos and are convenient sources for biochemical studies when cell number may be limiting from mouse embryos. To derive the imprinting signature of MEFs and potentially detect novel imprinted genes we characterized them using strand- and allel...

ORGANISM(S): Mus musculus

2013-11-18 | E-GEOD-49538 | biostudies-arrayexpress

CImP: Cellular Imprinting Proteomics applied to ocular disorders

A method (termed Cellular Imprinting Proteomics, CImP) for the identification and quantification of the ocular surface proteome using a minimally invasive membrane filter device is described. Moreover, The CImP method was applied to profile the molecular alterations in the eyes of infants exposed to...

ORGANISM(S): Homo sapiens (Human)

2020-07-23 | PXD014038 | Pride

Cellular imprinting proteomic

DNA sequence and chromatin modifiers cooperate to confer epigenetic bistability at imprinting control regions

DNA methylation is essential for embryonic development and implicated in the regulation of genomic imprinting. Genomic imprinting is established in the germline through parent-specific methylation of distinct cis-regulatory DNA sequences, called imprinting control regions (ICRs). Which factors bind ...

ORGANISM(S): Mus musculus (Mouse)

2023-03-10 | PXD034918 | Pride

Epigenetic Dna methylation Genomic imprinting

Imprinting RNAseq

PRJEB4012 | ENA

Reciprocal, methylation-dependent binding of Zfp57 and Gzf1 safeguards Dlk1-Dio3 imprinting during developmental reprogramming

Genomic imprinting secures parent-specific gene expression through differential DNA methylation at imprinted control regions (ICRs). However, how unmethylated alleles resist de novo methylation remains unclear. Using an allelic Dlk1-Dio3 ICR methylation reporter and genome-wide loss-of-function scre...

ORGANISM(S): Mus musculus (Mouse)

2026-08-04 | PXD080456 | Pride

Methylation Mus musculus Gzf1 Imprinting

Extensive demethylation of repetitive elements during seed development underlies gene imprinting

DNA methylation is an epigenetic mark associated with transposable element silencing and gene imprinting in flowering plants and mammals. In plants, imprinting occurs in the endosperm, which nourishes the embryo during seed development. We have profiled Arabidopsis DNA methylation genome-wide in the...

ORGANISM(S): Arabidopsis thaliana

2009-06-12 | E-GEOD-14570 | biostudies-arrayexpress

Imprinting Affy

Murine long-term hematopoietic stem cells (HSCs), short-term HSCs and multipotent progenitor cells (MPPs) were isolated from bone marrow and expression profiled on Affy chips. The behavior of maternal-specific imprinting genes, particularly in the H19-Igf2 locus, was focused on, to see if any might...

ORGANISM(S): Mus musculus

2013-08-12 | E-MTAB-1644 | biostudies-arrayexpress

MLID imprinting disorders

PRJNA817519 | ENA

Previous page
1 / 453
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 453
Next page

Sort by:

Relevance

Page size

4525 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

First Public Date

Modelling Approach

Study status

Lab affiliation

Tags

Keyword

IsPrivate

Classification

Modification

Study type

Release Date

Location

OmicsDI is part of the ELIXIR infrastructure

Tweets