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MetabolomicsIdentification of AK4 and RHOC as novel oncogenes addicted by adult T-cell leukemia
Adult T-cell leukemia (ATL) is a highly aggressive T-cell malignancy characterized by human T-cell leukemia virus type 1 (HTLV-1) infection. ATL has a very poor prognosis and lacks satisfactory treatments; therefore, it is critical to identify novel targets in ATL cells in order to develop effective...
2025-02-03 | MTBLS11858 | MetaboLights
MetabolomicsIdentification of AK4 and RHOC as novel oncogenes addicted by adult T-cell leukemia
Adult T-cell leukemia (ATL) is a highly aggressive T-cell malignancy characterized by human T-cell leukemia virus type 1 (HTLV-1) infection. ATL has a very poor prognosis and lacks satisfactory treatments; therefore, it is critical to identify novel targets in ATL cells in order to develop effective...
2025-02-03 | MTBLS11844 | MetaboLights
GenomicsIdentification of small RNAs interacting with LARP7
Identification of small RNAs interacting with LARP7
PRJNA522462 | ENA
TranscriptomicsIdentification of RNAs associated with telomeres by enChIP-RNA-Seq
Accumulating evidence suggests important roles of RNAs interacting with genomic regions in the regulation of genome functions including X chromosome inactivation and gene expression. However, no method to identify RNAs interacting with a given genomic region in a non-biased manner has been reported....
ORGANISM(S): Mus musculus 
2015-04-16 | E-GEOD-60425 | biostudies-arrayexpress
ProteomicsIdentification of UFBP1 interacting proteins
UFBP1 (UFM1-binding and PCI domain-containing protein 1, also called DDRGK domain-containing protein 1, Dashurin, or C20orf116) is a protein that also participates in the ufmylation conjugating systems besides the E1 ubiquitin-like modifier-activating enzyme 5 (UBA5), the E2, UFM1-conjugating enzyme...
ORGANISM(S): Homo sapiens (Human) 
2018-05-08 | PXD009051 | Pride
293t Interacting proteins Homo sapiens Orbitrap Ufbp1 
TranscriptomicsMixture models and wavelet transforms reveal high confidence RNA-protein interaction sites in MOV10 PAR-CLIP data
The Photo-Activatable Ribonucleoside-enhanced CrossLinking and ImmunoPrecipitation (PAR-CLIP) method was recently developed for global identification of RNAs interacting with proteins. The strength of this versatile method results from induction of specific T to C transitions at sites of interaction...
ORGANISM(S): Homo sapiens 
2012-08-07 | E-GEOD-37524 | biostudies-arrayexpress
GenomicsIdentification of differential expression gene of LncRNA interacting with NLRP3 protein in RAW264.7 cells infected with Salmonella typhimurium and uninfected cells
Identification of differential expression gene of LncRNA interacting with NLRP3 protein in RAW264.7 cells infected with Salmonella typhimurium and uninfected cells
PRJNA1053826 | ENA
TranscriptomicsIdentification of HP1 protein binding sites in Drosophila Kc cells using DamID
Heterochromatin protein HP1 is thought to play key role in chromatin structure and gene regulation. We performed a genome-wide mapping of HP1 target genes in the non-polytenic Drosophila Kc cells by using DamID. This approach is based on the ability of a chromatin protein fused to Escherichia coli D...
ORGANISM(S): Drosophila melanogaster 
2007-07-05 | E-MEXP-864 | biostudies-arrayexpress
TranscriptomicsIdentification of Murine Uterine Genes Regulated in a Ligand-Dependent Manner by the Progesterone Receptor.
Progesterone (P4) acting through its cognate receptor, the progesterone receptor (PR), plays an important role in uterine physiology. The PR knockout (PRKO) mouse has demonstrated the importance of the P4-PR axis in the regulation of uterine function. To define the molecular pathways regulated by P4...
ORGANISM(S): Mus musculus 
2012-08-06 | E-GEOD-39920 | biostudies-arrayexpress
GenomicsIdentification of small RNAs interacting with FLAG/HA(FH)-tagged LARP7
Identification of small RNAs interacting with FLAG/HA(FH)-tagged LARP7
PRJNA522460 | ENA
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