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TranscriptomicsComparison of Arabidopsis stem base to first internode transcriptional profiles
Subsequently to primary growth, most dicotyledonous plants undergo secondary growth leading to an increased diameter of growth axes. During secondary growth initiation in shoots, a cylindrical meristem, the vascular cambium, is established by the initiation of meristematic activity in interfascicula...
ORGANISM(S): Arabidopsis thaliana 
2010-06-05 | E-GEOD-15446 | biostudies-arrayexpress
ProteomicsShotgun proteomics of a rice elongating internode at boosting stage
Stem internodes of grasses function in mechanical support, transport, and, in some species are a major sink organ for carbon in the form of cell wall polymers. To establish the rice elongating internode as a model for secondary cell wall development, we conducted cell wall composition, proteomic and...
ORGANISM(S): Oryza sativa (Rice) 
2017-08-04 | PXD003676 | Pride
Stem Hdmse Internode Cell wall Rice Ltq orbitrap xl 
ProteomicsComparision of an AGCVIII kinase mutant with wild type in sorghum internode tissues
An AGCVIII kinase (Dw2) regulates sorghum stem internode growth, but the underlying mechanism and signaling network are unknown. Here we provide evidence that mutation of Dw2 reduces cell proliferation in internode intercalary meristems, inhibits endocytosis, and alters the distribution of heteroxyl...
ORGANISM(S): Sorghum bicolor 
2020-11-20 | PXD020160 | Pride
Sorghum agcviii kinase phosphoproteomics dw2 cell proliferation internode 
TranscriptomicsExpression data from stem samples taken from the base and the first internode of Arabidopsis wildtype and wox4-1 plants
Stem samples of wildtype Columbia plants and the wox4-1 mutant (Gabi_462G01) were analyzed in order to draw a connection between general transcriptomic changes during interfascicular formation in the wildtype and WOX4-dependent gene regulation during this process. We used microarrays to identify fac...
ORGANISM(S): Arabidopsis thaliana 
2011-09-29 | E-GEOD-24781 | biostudies-arrayexpress
Proteomicscentipedegrass tiller bud and internode proteome
This study investigate the differentially expressed proteins in tiller bud and internode between a high tillering mutant and wild type.
ORGANISM(S): Eremochloa ophiuroides 
2024-06-16 | PXD047559 | Pride
Centipedegrass Tiller bud Proteome 
ProteomicsProteome, Metabolite, and Cell Wall Profiling of an Elongating Rice Stem Internode
LC-MS/MS proteomics data was generated as part of an Isobaric tag (iTRAQ 4-plex) labeling experiment conducted on Oryza sativa ssp. japonica cv. Kitaake.
ORGANISM(S): Oryza sativa (Rice) 
2017-08-04 | PXD006536 | Pride
Proteomics Metabolomics Internode Cell wall 
TranscriptomicsTranscriptomes of Rice internode before and after heading
To identify genes that co-express with rice cellulose synthase genes involved in rice secondary cell wall formation, transcriptome analyses was performed using rice internodesbefore and after the heading stage, where secondary cell wall formation extensively occur. Transcriptomes of rice third or th...
ORGANISM(S): Oryza sativa 
2013-10-01 | E-GEOD-51289 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of rice dwarf mutant Fukei71
Microarray analysis was used to identify candidate genes involved in the formation of hydroxycinnamoyl-arabinoxylan (AX) and secondary cell walls in rice. Gene expression in the internode pith parenchyma of Fukei71 (F71), the rice dwarf mutant that accumulates large amounts of hydroxycinnamoyl-AX in...
ORGANISM(S): Oryza sativa Japonica Group 
2010-04-01 | E-MEXP-2311 | biostudies-arrayexpress
GenomicsTomato Shade Avoidance: Unraveling Internode Elongation and Hormonal Harmony
Tomato Shade Avoidance: Unraveling Internode Elongation and Hormonal Harmony
PRJNA1075767 | ENA
UnknownSoybean reduced internode 1 determines internode length and improves grain yield at dense planting.
Not available
S-EPMC10692089 | biostudies-literature
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