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ProteomicsComplementary metaproteomic approaches to assess marine bacteriopankton response towards algal bloom
In this project, the metaproteome of the marine bacterioplankton was analyzed to assess its respone towards an algal bloom in the southern North Sea in spring 2010. Proteins were extracted applying two different methods: (i) applying chemical cell lysis using trifluoroethanol in combination with in-...
ORGANISM(S): environmental samples 
2017-04-11 | PXD004944 | Pride
Metaproteome Algal bloom Marine bacterioplankton 
ProteomicsFast hyperbaric decompression after heliox saturation altered the brain proteome in rats
In order to better understand physiological mechanisms and neurological symptoms involved in the development of decompression sickness we determined effects in rats on the brain proteome of fast decompression (1 bar/20 s) compared to controls (1 bar/10 min) after heliox saturation diving. The orbitr...
ORGANISM(S): Rattus norvegicus (Rat) 
2017-10-10 | PXD006349 | Pride
Cytoskeleton Synaptic vesicle Fast decompression Label-free proteomics S100b Diving Translation initiation Heliox saturation Ribosomal proteins 
UnknownValidated method for phytohormone quantification in plants.
Not available
S-EPMC4143963 | biostudies-literature
UnknownFast hyperbaric decompression after heliox saturation altered the brain proteome in rats.
Not available
S-EPMC5627932 | biostudies-literature
ProteomicsQuantification of ATIs in Wheat by LC-MS/MS – LFQ IonTrap
A selection of ATIs was silenced in the common wheat cultivar Bobwhite and durum wheat cultivar Svevo by RNAi and gene editing, respectively, in order to reduce the amounts of ATIs. The controls and silenced lines were analyzed after digestion to peptides by LC-MS/MS with different approaches to eva...
ORGANISM(S): Triticum aestivum (Wheat) 
2022-10-14 | PXD034769 | Pride
Amylase/trypsin inhibitor  wheat  crsipr-cas9  rnai 
ProteomicsATM and ATR- dependent protein phosphorylation induced within 15 minutes after gamma irradiation in Arabidopsis thaliana
Pilotexp_IMAC_TiO2_eluate_ATM_ATR_dep_phos_15min_postIR: Proteins were isolated from 4 different conditions of Arabidopsis thaliana plants: wild type untreated, wild type irradiated, atm/atr mutant untreated, atm/atr mutant irradiated The proteins were tryptically digested and labelled each with one...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2015-01-09 | PXD000033 | Pride
Phosphorylation Arabidopsis  wt vs atm Atr double mutant  itraq 
UnknownComplementary Metaproteomic Approaches to Assess the Bacterioplankton Response toward a Phytoplankton Spring Bloom in the Southern North Sea.
Not available
S-EPMC5364173 | biostudies-literature
UnknownAnalysis of cell wall proteins regulated in stem of susceptible and resistant tomato species after inoculation with Ralstonia solanacearum: a proteomic approach.
Not available
S-EPMC3128696 | biostudies-literature
ProteomicsProteomic analysis of Trichomonas vaginalis phagolysosomes, lysosomal targeting, and unconventional secretion of cysteine peptidases
Lysosome represent a central degradative compartment of eukaryote cells, yet little is known about the biogenesis and function of this organelle in parasitic protists. Whereas the mannose-6 phosphate (M6P)-dependent system is dominant for lysosomal targeting in metazoans, oligosaccharide-independent...
ORGANISM(S): Trichomonas vaginalis 
2021-10-29 | PXD029152 | Pride
Trichomonas vaginalis Glycosylation Mannose-6-phosphate receptor Phagolysosome Cysteine peptidase Proteome 
ProteomicsThe impact of Zika virus exposure on the placental proteomic profile
Zika virus (ZIKV) infection has caused severe unexpected clinical outcomes in neonates and adults during the recent outbreak in Latin America, particularly in Brazil. Congenital malformations associated with ZIKV have been frequently reported; nevertheless, the mechanism of vertical transmission and...
ORGANISM(S): Homo sapiens (Human) 
2021-12-30 | PXD025764 | Pride
Proteomics Antibody opsonization Zika virus Cell death Placenta 
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