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ProteomicsS. cerevisiae DDA orbitrap-based benchmark datasets. C4PR_LIV
In this study, label free peptide intensities from a well quantitatively characterised yeast cell lysate were acquired on two orbitrap mass spectrometers (LTQ-Velos and Q Exactive HF). Additionally, samples containing Universal Proteomics Standard and the Proteomics Dynamic range Standard (http://ww...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2017-08-09 | PXD003472 | Pride
Peptide ionization Hydrophobicity Benchmark dataset Coelution Peptide detectability 
ProteomicsThe human phosphoproteome map based on PRIDE data
This project contains raw data, intermediate files and results used to create the PRIDE human phosphoproteome map. The map is based on joint reanalysis of 110 publicly available human datasets. All relevant datasets were retrieved from the PRIDE database, and after manual curation, only assays that ...
ORGANISM(S): Homo sapiens (Human) 
2019-02-13 | PXD012174 | Pride
Post translational modification Reanalysis Ptm Public data reuse Phosphorylation 
ProteomicsThe landscape of protein expression in cancer based on public proteomics data
This project contains raw data, intermediate files and results used to create the integrated map of protein expression in human cancer (including data from cell lines and tumours). The map is based on joint reanalysis of 11 large-scale quantitative proteomics studies. The datasets were primarily ret...
ORGANISM(S): Homo sapiens (Human) 
2019-07-18 | PXD013455 | Pride
Tumours Meta-analysis Cell lines Reanalysis Public data reuse Quantification 
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