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TranscriptomicsComparison of H. pylori subclones
Helicobacter pylori has a very plastic genome, reflecting its high rate of recombination and point mutation. This plasticity promotes divergence of the population by the development of subclones and presumably enhances adaptation to host niches. We have investigated the genotypic and phenotypic char...
ORGANISM(S): Helicobacter pylori 
2005-10-20 | E-GEOD-3478 | biostudies-arrayexpress
TranscriptomicsMouse response to H. pylory
Helicobacter pylori infects the stomachs of half of all humans. It has a relatively benign relationship with most hosts, but produces severe pathology, including gastric cancer, in others. Identifying the relative contributions of host, microbial and environmental factors to the outcome of infection...
ORGANISM(S): Helicobacter pylori 
2005-09-09 | E-GEOD-3272 | biostudies-arrayexpress
GenomicsETV1 ChIP-seq in OE33 esophageal adenocarcinoma cells
Chromatin immunoprecipitation using anti-ETV1 a.k.a. ER81 (Abcam: ab81086) antibodies or input DNA in an OE33 cell line
ORGANISM(S): Homo sapiens 
2017-07-07 | E-MTAB-5168 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of germ-free transgenic mice colonized with genotyped Helicobacter pylori strains from a case-control study of gastric cancer
Helicobacter pylori infects the stomachs of half of all humans. It has a relatively benign relationship with most hosts, but produces severe pathology, including gastric cancer, in others. Identifying the relative contributions of host, microbial and environmental factors to the outcome of infection...
ORGANISM(S): Helicobacter pylori 
2005-09-02 | E-SMDB-1581 | biostudies-arrayexpress
UnknownHigher leaf nitrogen content is linked to tighter stomatal regulation of transpiration and more efficient water use across dryland trees.
Not available
S-EPMC9542767 | biostudies-literature
TranscriptomicsATAC-seq of oesophageal cell lines and tissue samples
ATAC-seq in oesophageal cell lines: OE19, HEEPIC, and human eosophageal tissue samples
ORGANISM(S): Homo sapiens 
2017-07-07 | E-MTAB-5169 | biostudies-arrayexpress
TranscriptomicsRemodeling of Brown and White Adipose Tissue by NT-PGC-1α-Mediated Gene Regulation
The β-adrenergic receptor signaling pathway is a major component of adaptive thermogenesis in brown and white adipose tissue during cold acclimation. The β-AR activation highly induces transcriptional coactivator PGC-1α and its splice variant N-terminal (NT)-PGC-1α, promoting the transcription progr...
ORGANISM(S): Mus musculus 
2015-08-07 | E-GEOD-71774 | biostudies-arrayexpress
TranscriptomicsTranscriptome dynamics of developing photoreceptors in 3-D retina cultures recapitulates temporal sequence of human cone and rod differentiation revealing cell surface markers and gene networks
To define molecular mechanisms underlying rod and cone differentiation, we generated H9 human embryonic stem cell line carrying a GFP reporter that is controlled by the promoter of cone-rod homeobox (CRX) gene, the first known marker of post-mitotic photoreceptor precursors. CRXp-GFP reporter in H9 ...
ORGANISM(S): Homo sapiens 
2015-08-03 | E-GEOD-67645 | biostudies-arrayexpress
TranscriptomicsCharacterization of human embryonic stem cells with features of neoplastic progression
Cultured human embryonic stem (hES) cells can acquire genetic and epigenetic changes that make them vulnerable to transformation. As hES cells with cancer-cell characteristics share properties with normal hES cells, such as self-renewal, teratoma formation and the expression of pluripotency markers,...
ORGANISM(S): Homo sapiens 
2010-06-24 | E-GEOD-13995 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of diagnostic tumoral samples in relation to primary response to drug treatment
Expression profile of diagnostic tumoral samples in relation to primary response to drug treatment
ORGANISM(S): Homo sapiens 
2005-10-30 | E-MEXP-388 | biostudies-arrayexpress
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