Jing Chen C - OmicsDI

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Unknown (841)
Proteomics (148)
Transcriptomics (83)
Genomics (28)
Metabolomics (23)
Multiomics (5)
Models (2)
Other (1)

Organisms

Homo sapiens (141)
Mus musculus (59)
Rattus norvegicus (6)
Escherichia coli (5)
Danio rerio (3)
Sus scrofa (2)
Macaca mulatta (2)
Caenorhabditis elegans (2)
Gallus gallus (2)
Saccharomyces cerevisiae (2)
Bos taurus (2)
Mycobacterium tuberculosis H37Rv_2009 (2)
Rattus rattus (2)
Severe acute respiratory syndrome coronavirus 2 (2)
Oryza sativa (2)
Brucella abortus str. 2308 A (1)
Nannochloropsis oceanica (1)
Manihot esculenta (1)
Populus tomentosa (1)
Streptococcus suis (1)
Citrus sinensis (1)
Oryctolagus cuniculus (1)
Drosophila melanogaster (1)
Arabidopsis thaliana (1)
108887 (1)
Ailuropoda melanoleuca (1)
Chlorocebus sabaeus (1)
Dimocarpus longan (1)
Klebsiella pneumoniae JH1 (1)
Schistosoma mansoni (1)

Repository

biostudies-arrayexpress (87)
iProX (86)
pride (35)
EGA (24)
MetaboLights (20)
PeptideAtlas (14)
MassIVE (10)
GNPS (3)
BioModels (2)
PAXDB (2)
GPMDB (1)
jPOST (1)

Tissue

Plasma Non-glyco (11)
Cell culture (5)
Others (3)
Blood cell (3)
Blood serum (3)
Adrenal adenoma cell (2)
Blood plasma (2)
Brain (2)
Leaf (2)
Liver (2)
Skin (2)
Testis (2)
Cerebrospinal fluid (1)
Colonic mucosa (1)
Epithelial cell (1)
Epithelial cell of lung (1)
Epithelium of stomach (1)
Fibroblast (1)
Heart (1)
Hepatocyte (1)
Multiple myeloma cell line (1)
Neutrophil (1)
Ovary (1)
Sertoli cell (1)

Disease

Acute leukemia (2)
Endometrioid carcinoma (1)
Not Available (1)
Irritable bowel syndrome (1)
Multidrug-resistant tuberculosis (1)
Non-small cell lung carcinoma (1)
Oligospermia (1)
Pancreatic carcinoma (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (35)
Shotgun proteomics (18)
Mass spectrometry (12)
Mass spectrometry assay (7)
Bottom-up proteomics (4)
SRM/MRM (3)
Top-down proteomics (3)
Illumina HiSeq 2000 (2)
Data-dependent acquisition (2)
SWATH MS (2)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
NMR spectroscopy (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Gel-based experiment (1)
MSE (1)
Proteogenomics (1)

Instrument Platform

TripleTOF 5600 (12)
Liquid Chromatography MS - negative - reverse phase (8)
Liquid Chromatography MS - positive - reverse phase (8)
Q Exactive (5)
LTQ Orbitrap Elite (3)
Liquid Chromatography MS - alternating - reverse-phase (3)
Illumina HiSeq 2000 (2)
Q Exactive HF (2)
TripleTOF 6600 (2)
Orbitrap Fusion Lumos (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Illumina HiSeq 2000 platform (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
Instrument (1)
LTQ Orbitrap Velos (1)
Orbitrap Eclipse (1)
Capillary electrophoresis MS - negative (1)
Capillary electrophoresis MS - positive (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Nuclear Magnetic Resonance (NMR) - (1)
TripleTOF 5600 (AB Sciex) (1)
QExactive (1)

Publication Date

2022 (27)
2024 (24)
2025 (22)
2026 (21)
2015 (20)
2014 (20)
2023 (19)
2021 (18)
2012 (15)
2016 (14)
2013 (14)
2020 (11)
2011 (7)
2019 (6)
2010 (5)
2009 (4)
2007 (4)
2017 (4)
2006 (2)
2018 (2)
2008 (1)

UNIPROT ID/AC

1433B_SOYBN (2)
1433D_SOYBN (2)
6DCS_SOYBN (2)
A1YZE0_SOYBN (2)
A5I866_SOYBN (2)
A5JUQ4_SOYBN (2)
A5JVZ7_SOYBN (2)
A5Z2K3_SOYBN (2)
A7BIC9_SOYBN (2)
A7X657_SOYBN (2)
A7XZJ7_SOYBN (2)
A9CPA7_SOYBN (2)
A9QNE4_SOYBN (2)
ACCD_SOYBN (2)
ACT3_SOYBN (2)
AKR1_SOYBN (2)
AMYB_SOYBN (2)
AOX3_SOYBN (2)
ATPB_SOYBN (2)
ATPE_SOYBN (2)
ATPF_SOYBN (2)
B0M195_SOYBN (2)
B0M196_SOYBN (2)
B0M1A0_SOYBN (2)
B0M1A4_SOYBN (2)
B0M1A6_SOYBN (2)
B0M1A9_SOYBN (2)
B0M1B1_SOYBN (2)
B1ACD3_SOYBN (2)
B1ACD5_SOYBN (2)

ENSEMBL ID

ENSG00000170477 (12)
ENSG00000247315 (7)
ENSG00000147251 (4)

CHEBI ID

CHEBI:17368 (9)
CHEBI:16027 (7)
CHEBI:16704 (7)
CHEBI:16708 (7)
CHEBI:16737 (7)
CHEBI:16750 (7)
CHEBI:16919 (7)
CHEBI:17154 (7)
CHEBI:17568 (7)
CHEBI:17596 (7)
CHEBI:17895 (7)
CHEBI:18089 (7)
CHEBI:15741 (6)
CHEBI:15891 (6)
CHEBI:16015 (6)
CHEBI:16235 (6)
CHEBI:16335 (6)
CHEBI:17012 (6)
CHEBI:17053 (6)
CHEBI:17821 (6)
CHEBI:30769 (6)
CHEBI:7916 (6)
CHEBI:15354 (5)
CHEBI:15727 (5)
CHEBI:15756 (5)
CHEBI:15971 (5)
CHEBI:16040 (5)
CHEBI:16359 (5)
CHEBI:16393 (5)
CHEBI:16414 (5)

Metabolite Name

4-Pyridoxic acid (8)
Creatine (8)
Hypoxanthine (8)
Taurine (8)
Thymine (7)
Uracil (7)
Xanthine (7)
Adenine (6)
Choline (6)
Creatinine (6)
Indole (6)
L-Tyrosine (6)
Nicotinamide (6)
Oleamide (6)
Pyruvic acid (6)
Succinic acid (6)
1-Methylnicotinamide (5)
2-Phenylacetamide (5)
Adenosine (5)
Daidzein (5)
Genistein (5)
Guanine (5)
Guanosine (5)
Inosine (5)
L-Glutamine (5)
L-Histidine (5)
L-Phenylalanine (5)
N,N-Dimethylsphingosine (5)
Palmitoylcarnitine (5)
Pantothenic acid (5)

IsPrivate

False (2)

Model Flag

Non Kinetic (1)

Modelling Approach

Constraint-based model (2)

Study type

Transcription profiling by array (58)
RNA-seq of coding RNA (16)
Transcription profiling by RT-PCR (2)
Comparative genomic hybridization by array (2)
ChIP-seq (2)
Methylation profiling by high throughput sequencing (2)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (139)
2024 (124)
2023 (118)
2022 (94)
2021 (76)
2020 (60)
2019 (41)
2016 (37)
2018 (35)
2017 (30)
2015 (29)
2014 (28)
2013 (25)
2026 (24)
2012 (24)
2011 (17)
2010 (10)
2009 (5)
2007 (5)
2006 (3)
2008 (2)
2005 (1)
2002 (1)

Lab affiliation

Shanghai Institute of Materia Medica, Chinese Academy of Sciences (3)
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
the First Affiliated Hospital of Chongqing Medical University (2)
1Department of Medicine, The University of Chicago (1)
Acupuncture-moxibustion and Orthopedic College, Hubei University of Chinese Medicine, Wuhan, China (1)
Affiliation of Zhengting Chen, Jing Wang, Hebo Zhao, Yaping Yue, Biao Liu, Yu Zhao, Dao-Xiu Zhou: National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, 430070 Wuhan, China (1)
Beijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing 100048, China (1)
Bone Marrow Transplantation Center, Department of Hematology, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, China (1)
Boston Children's Hospital (1)
Boston Children’s Hospital (1)
Center of Reproductive Medicine, Nanjing Jinling Hospital, Clinical School of Medical College, Nanjing University, China. (1)
College of Science, Mathematics, and Technology, Wenzhou-Kean University (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences (1)
Department of Pathology (1)
Department of Thoracic Surgery, First Affiliated Hospital of Kunming Medical University, Kunming 650000, Yunnan, China. (1)
Harbin Medical University Cancer Hospital (1)
Institute of dermatology, Chinese academy of medical sciences (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University (1)
No.892, Yuanda 2 Road, furong district, changsha，Hunan province (1)
Northwest University (1)
Peking University Third Hospital No. 49 North Garden Road, Haidian District Beijing 100191, China (1)
School of Basic Medical Science, Central South University (1)
Shanghai Institue of Materia and Medica, CAS (1)
State Key Laboratory of Molecular Oncology, School of Medicine, Tsinghua University, Beijing 100084, China (1)
State Key Laboratory of National Security Specially Needed Medicines, Beijing 100039, China. (1)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University, Nanjing, Jiangsu, China. (1)
The Center for Chemical Biology, Drug Discovery and Design Center, State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China (1)
The First Affiliated Hospital of Anhui Medical University (1)
Tsinghua university (1)
Zhejiang University School of Medicine (1)

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Association of the ARL15 rs6450176 SNP and serum lipid levels in the Jing and Han populations.

Not available

S-EPMC4680439 | biostudies-literature

Functional analysis of a de novo mutation c.1692 del A of the PHEX gene in a Chinese family with X-linked hypophosphataemic rickets.

Not available

S-EPMC6719531 | biostudies-literature

Two novel VPS33B mutations in a patient with arthrogryposis, renal dysfunction and cholestasis syndrome in mainland China.

Not available

S-EPMC3886028 | biostudies-literature

TRIM21 enhances bortezomib sensitivity in multiple myeloma by halting pro-survival autophagy

Bortezomib (bort) is an effective therapeutic agent for multiple myeloma (MM) patients; however, the majority of patients develop drug resistance. Autophagy, a highly conserved process that recycles cytosol or entire organelles via lysosomal activity, is essential for the survival, homeostasis and d...

ORGANISM(S): Homo sapiens (Human)

2023-10-24 | PXD042004 | Pride

A commonly used Chinese herbal formula, Shu-Jing-Hwo-Shiee-Tang, potentiates anticoagulant activity of warfarin in a rabbit model.

Not available

S-EPMC6270155 | biostudies-literature

Efficacy and safety of Qi-Jing Hui-Xin Decoction in the treatment of coronary microvascular angina: study protocol for a randomized, controlled, multi-center clinical trial.

Not available

S-EPMC8379786 | biostudies-literature

Association between CYP24A1 polymorphisms and the risk of colonic polyps and colon cancer in a Chinese population.

Not available

S-EPMC5537184 | biostudies-literature

Autoantibodies in Chinese patients with chronic hepatitis B: prevalence and clinical associations.

Not available

S-EPMC4284347 | biostudies-literature

Decreased histone H2B monoubiquitination in malignant gastric carcinoma.

Not available

S-EPMC3848160 | biostudies-literature

Identification of missing proteins defined by chromosome-centric proteome project in the cytoplasmic detergent-insoluble proteins

Data from ProteomeXchange, PXD ID: PXD001694. File: lungSILAC_first_14.mzml. Published as part of J Proteome Res. 2015 Jun 25 . From the Abstract: {{i}} ... As most samples prepared and analyzed in the C-HPP framework were focusing on detergent soluble proteins, we posit that as a natural compositi...

ORGANISM(S): Homo_sapiens_viruses, Human

GPM32320016148 | GPMDB

Resource Reanalysis

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1126 Results

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IsPrivate

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