Johnston S S - OmicsDI

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Unknown (2680)
Proteomics (64)
Transcriptomics (55)
Genomics (18)
Metabolomics (3)
Other (1)

Organisms

Homo sapiens (61)
Mus musculus (37)
Saccharomyces cerevisiae (9)
Drosophila melanogaster (4)
Arabidopsis thaliana (2)
Trypanosoma brucei (2)
Canis lupus (1)
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Oryza sativa Japonica Group (1)
Gallus gallus (1)
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Bos taurus (1)
Chlamydomonas reinhardtii (1)
Escherichia coli (1)
Lupinus albus (1)
Macropus giganteus (1)
Phascolarctos cinereus (1)
Physcomitrium patens (1)

Organisms

Saccharomyces cerevisiae (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (72)
pride (48)
EGA (6)
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Tissue

Cell culture (15)
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Disease

Breast cancer (3)
Glioblastoma (3)
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Lymphoma (2)
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Not Available (1)
Alzheimer's disease (1)
Burkitt lymphoma (1)
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Obesity (1)
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Technology Type

Mass Spectrometry (48)
Shotgun proteomics (23)
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Data-independent acquisition (4)
Mass spectrometry (3)
Top-down proteomics (3)
SWATH MS (2)
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HDMSE (1)

Instrument Platform

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Q Exactive (1)

Publication Date

2025 (17)
2012 (10)
2026 (9)
2016 (9)
2014 (9)
2013 (9)
2011 (9)
2021 (8)
2023 (8)
2015 (7)
2022 (7)
2010 (6)
2019 (4)
2020 (3)
2017 (3)
2008 (2)
2007 (2)
2018 (2)
2009 (1)
2006 (1)
2005 (1)
2004 (1)
2003 (1)
2024 (1)

CHEBI ID

CHEBI:116314 (2)
CHEBI:14336 (2)
CHEBI:15428 (2)
CHEBI:15611 (2)
CHEBI:15676 (2)
CHEBI:15724 (2)
CHEBI:15728 (2)
CHEBI:15741 (2)
CHEBI:15760 (2)
CHEBI:15891 (2)
CHEBI:15940 (2)
CHEBI:15999 (2)
CHEBI:16010 (2)
CHEBI:16108 (2)
CHEBI:16199 (2)
CHEBI:16244 (2)
CHEBI:16335 (2)
CHEBI:16344 (2)
CHEBI:16359 (2)
CHEBI:16449 (2)
CHEBI:16530 (2)
CHEBI:16552 (2)
CHEBI:16695 (2)
CHEBI:16704 (2)
CHEBI:16737 (2)
CHEBI:16750 (2)
CHEBI:16755 (2)
CHEBI:16811 (2)
CHEBI:16870 (2)
CHEBI:16914 (2)

Metabolite Name

Cytidine (2)
Guanine (2)
N-acetylserine (2)
Uridine (2)
Vanillin (2)
(-)-epigallocatechin (1)
(4-chloro-2-methylphenoxy)acetic acid (1)
(R)-2-hydroxystearic acid (1)
1,3-dimethylurate (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPC (P-16:0/20:4) (1)
1-(1-enyl-palmitoyl)-2-arachidonoyl-GPE (P-16:0/20:4) (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPC (P-16:0/18:2) (1)
1-(1-enyl-palmitoyl)-2-linoleoyl-GPE (P-16:0/18:2) (1)
1-(1-enyl-palmitoyl)-2-palmitoyl-GPC (P-16:0/16:0) (1)
1-(1-enyl-palmitoyl)-GPE (P-16:0) (1)
1-(1-enyl-stearoyl)-2-linoleoyl-GPE (P-18:0/18:2) (1)
1-(1-enyl-stearoyl)-GPE (P-18:0) (1)
1-arachidonoyl-GPC (20:4n6) (1)
1-arachidonoyl-GPI (20:4) (1)
1-linoleoyl-2-arachidonoyl-GPC (18:2/20:4n6) (1)
1-linoleoyl-GPC (18:2) (1)
1-linoleoyl-GPE (18:2) (1)
1-methylguanidine (1)
1-methylhistidine (1)
1-methylnicotinamide (1)
1-methylxanthine (1)
1-oleoyl-2-linoleoyl-GPC (18:1/18:2) (1)
1-oleoyl-GPC (18:1) (1)
1-oleoyl-GPI (18:1) (1)
1-palmitoyl-2-arachidonoyl-GPC (16:0/20:4) (1)

First Public Date

2019 (1)
2018 (1)
2014 (1)

Study type

Transcription profiling by array (37)
RNA-seq of coding RNA (9)
Proteomic profiling by array (8)
ChIP-seq (6)
DNA-seq (3)
RNA-seq of coding RNA from single cells (3)
RNA-seq of non coding RNA (2)
Transcription profiling by SAGE (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Other (1)

Release Date

2021 (302)
2022 (296)
2024 (279)
2023 (278)
2025 (246)
2020 (222)
2019 (171)
2018 (156)
2016 (117)
2015 (112)
2014 (96)
2017 (96)
2013 (65)
2011 (55)
2012 (51)
2010 (46)
2026 (41)
2009 (29)
2008 (23)
2006 (16)
2007 (13)
2005 (13)
2003 (9)
2004 (6)
2002 (5)
2000 (3)
1999 (2)
1998 (2)
1997 (2)

Lab affiliation

Signalling ISP, Babraham Institute, Cambridge, UK (3)
La Trobe University, Melbourne, Australia (2)
Atomic Virology Lab, Division of Virology, Department of Pathology, University of Cambridge (1)
Babraham Institute Cambridge CB22 3AT (1)
Breast Cancer Now The Institute of Cancer Research (1)
Breast Cancer Now Toby Robins Research Centre The Institute of Cancer Research London (1)
Canary Center at Stanford for Cancer Early Detection Department of Radiology School of Medicine Stanford University (1)
Cancer Research UK, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge, CB2 0RE (1)
Cancer Sciences Unit, Faculty of Medicine, University of Southampton, Southampton, UK (1)
Cancer Sciences, Faculty of Medicine, University of Southampton, UK (1)
Centre for Biologics Evaluation Biologics and Genetic Therapies Directorate Health Canada (1)
Centre for Infection and Immunity, Queen’s University Belfast, Belfast, Northern Ireland, BT9 7BL, UK. (1)
Centre for Inflammation Research, Institute for Regeneration and Repair (1)
Centre for Inflammation Research, Institute for Regeneration and Repair, University of Edinburgh (1)
Centre for Inflammation Research, Queen’s Medical Research Institute, University of Edinburgh, Edinburgh, UK (1)
Centre for Inflammation research, Institute for Regeneration and Repair, University of Edinburgh (1)
Charles Perkins Centre, School of Medical Sciences, University of Sydney, Sydney, Australia. (1)
Clinical and Experimental Sciences Unit, Faculty of Medicine, University of Southampton, Southampton SO16 6YD, UK Centre for Proteomic Research, Institute for Life Sciences, University of Southampton, Highfield Campus, Southampton, SO17 1BJ, UK (1)
Crop Genetics John Innes Centre Norfolk United Kingdom (1)
Department of Biochemistry and Pharmacology, University of Melbourne, Parkville, Melbourne, Victoria 3010, Australia (1)
Department of Chemistry and Biochemistry, Brigham Young University (1)
Department of Chemistry and Biochemistry, Brigham Young University (lab head) (1)
Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT, 84602 (1)
Department of Chemistry and Biochemistry, Brigham Young University. (1)
Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan Department of Bioengineering, School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan (1)
Faculty of Medicine, University of Maribor, Slovenia Faculty of Chemistry and Chemical Engineering, University of Maribor, Slovenia (1)
GlaxoSmithKline (GSK) (1)
Hayley Sharpe, Signalling, Babraham Institute, Cambridge, UK (1)
Institute for Molecular Biosciences University of Queensland Brisbane Qld 4072 Australia (1)
Institute of Parasitology, Biology Center, Czech Academy of Sciences, Branišovská 31, 370 05 České Budějovice, CZECH REPUBLIC (1)

Tags

xref:PubMed:30309916 (1)
xref:PubMed:19720826 (1)
xref:EuropePMC:PMC10416412 (1)

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Drosophila Johnston organ genes

Hemizygous ato[1]/Df(3R)p[13] null mutants lack Johnston organ (JO) in their 2nd antennal segment. We screened for genes that are expressed in JO by comparing the 2nd antennal segment transcriptomes between ato[1]/Df(3R)p[13] mutants and balanced Df(3R)p[13]/TM3 and ato[1]/TM3 controls. To assess t...

ORGANISM(S): Drosophila melanogaster

2012-08-31 | E-MEXP-3609 | biostudies-arrayexpress

Promises and Pitfalls of Latent Variable Approaches to Understanding Psychopathology: Reply to Burke and Johnston, Eid, Junghanel and Colleagues, and Willoughby.

Not available

S-EPMC8020488 | biostudies-literature

A Signaling Lipid Associated with Alzheimerâ€™s Disease Promotes Mitochondrial Dysfunction

Fundamental changes in the composition and distribution of lipids within the brain are believed to contribute to the cognitive decline associated with Alzheimerâ€™s disease (AD). The mechanisms by which these changes in lipid composition affect cellular function and ultimately cognition are not well...

ORGANISM(S): Saccharomyces cerevisiae

2016-01-21 | E-GEOD-40814 | biostudies-arrayexpress

Antidepressant Effects of (S)-Ketamine through a Reduction of Hyperpolarization-Activated Current I_h.

Not available

S-EPMC7322259 | biostudies-literature

The clinical significance of cathepsin S expression in human astrocytomas.

Not available

S-EPMC1868175 | biostudies-literature

Comparative genomic hybridization by array of Streptococcus pneumoniae isolates from the Mitis group to identify pneumococcal virulance genes

Data is also available from BuG@Sbase

ORGANISM(S): Streptococcus pneumoniae

2010-07-22 | E-BUGS-82 | biostudies-arrayexpress

Evaluation of variable new antigen receptors (vNARs) as a novel cathepsin S (CTSS) targeting strategy.

Not available

S-EPMC10728302 | biostudies-literature

Merging candidate gene approach with high throughput systems biology technology for the development of xylose utilising S. cerevisiae strains

Though highly efficient at fermenting hexose sugars, the ethanologenic yeast Saccharomyces cerevisiae has limited ability to ferment five-carbon sugars. As a significant portion of sugars found in cellulosic biomasses is the five carbon sugar xylose, S. cerevisiae must be engineered to metabolize pe...

ORGANISM(S): Saccharomyces cerevisiae

2012-07-14 | E-GEOD-27325 | biostudies-arrayexpress

Genetic variation in Austrostrongylus thylogale Johnston & Mawson, 1940 (Nematoda: Trichostrongylida) from the tammar wallaby, Notamacropus eugenii (Gray), and the quokka, Setonix brachyurus (Quoy & Gaimard) (Marsupialia: Macropodidae) in Australia.

Not available

S-EPMC7071675 | biostudies-literature

Protonation state of the Cu₄S₂ Cu_Z site in nitrous oxide reductase: redox dependence and insight into reactivity.

Not available

S-EPMC4583207 | biostudies-literature