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ProteomicsYang_NuA4_TIP60_structural_features
This submission contains the mass spectrometry files for the manuscript by Zhenlin Yang et al. that describes the unique structural features of the NuA4/TIP60 acetyltransferase and chromatin remodeling complex. MS experiments were performed from TAP purified complexes from K562 cells and MS files we...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-11-02 | MSV000093280 | MassIVE
TranscriptomicsDNA validation of LAB 2k v2
To study their metabolic potential in natural ecosystems, we developed a species-independent LAB microarray, containing 2,269 30-mer oligonucleotides, and targeting 406 genes that play a key role in the production of sugar catabolites, bacteriocins, exopolysaccharides, and aromas, in probiotic and b...
ORGANISM(S): Lactobacillus johnsonii 
2009-10-20 | E-GEOD-9082 | biostudies-arrayexpress
ProteomicsHypoxia-induced Changes in the Secretome of Human Preadipocytes and Adipocytes
White adipose tissue (WAT) is involved in energy metabolism by secretion of proteins with endocrine and paracrine effects. Dysregulation of the secretion pattern of obesity-associated enlarged WAT may lead to obesity-related disorders. This dysregulation may be the result of a hypoxic state caused b...
ORGANISM(S): Homo sapiens (Human) 
2013-10-29 | PXD000162 | Pride
Human (pre)adipocytes Hypoxia Turnover Secretome 
TranscriptomicsNova1 is a master regulator of alternative splicing in pancreatic beta cells
Alternative splicing (AS) is a fundamental mechanism for the regulation of gene expression. It affects more than 90% of human genes but its role in the regulation of pancreatic beta cells, the producers of insulin, remains unknown. Our recently published data indicated that the M-bM-^@M-^\neuron spe...
ORGANISM(S): Rattus norvegicus 
2014-10-01 | E-GEOD-59633 | biostudies-arrayexpress
UnknownA Highly Phenotyped Open Access Repository of Alpha-1 Antitrypsin Deficiency Pluripotent Stem Cells.
Not available
S-EPMC7363960 | biostudies-literature
TranscriptomicsTGF-beta/Smad3-dependent gene expression analysis in naive CD4 T cells
Investigation of transcript level modulation in unstimulated and TGF-beta treated (with or without superimposed T-cell receptor and CD28 stimulation) naive CD4 T cells from wild type or Smad3-deficient littermate mice. Smad3 is a critical signaling molecule and transcription factor downstream of TGF...
ORGANISM(S): Mus musculus 
2012-08-31 | E-GEOD-40494 | biostudies-arrayexpress
UnknownBRAF Inhibition in BRAFV600-Mutant Gliomas: Results From the VE-BASKET Study.
Not available
S-EPMC6286161 | biostudies-literature
UnknownCTLA-4<sup>+</sup>PD-1<sup>-</sup> Memory CD4<sup>+</sup> T Cells Critically Contribute to Viral Persistence in Antiretroviral Therapy-Suppressed, SIV-Infected Rhesus Macaques.
Not available
S-EPMC5679306 | biostudies-literature
UnknownTLR8 escapes X chromosome inactivation in human monocytes and CD4+ T cells.
Not available
S-EPMC10506212 | biostudies-literature
ProteomicsSystematic identification of hypothetical bacteriophage proteins targeting key protein complexes of Pseudomonas aeruginosa
Addressing the functionality of predicted genes remains an enormous challenge in the post-genomic era. A prime example of genes lacking functional assignments are the poorly conserved, early expressed genes of lytic bacteriophages, whose products are involved in the subversion of the host metabolism...
ORGANISM(S): Pseudomonas aeruginosa PAO1 
2014-09-09 | PXD001199 | Pride
Bacteriophages P. aeruginosa Functional annotation Affinity purifications Interactomics 
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