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GenomicsGenome-wide analyses reveal the extent of opportunistic STAT5 binding that does not yield transcriptional activation of neighboring genes.
Signal Transducers and Activators of Transcription (STAT) 5A/B regulate cytokine-inducible genes upon binding to GAS motifs. It is not known what percentage of genes with GAS motifs bind to and are regulated by STAT5. Moreover, it is not clear whether genome-wide STAT5 binding is modulated by its co...
ORGANISM(S): Mus musculus 
2012-01-12 | E-GEOD-34986 | biostudies-arrayexpress
MetabolomicsSelaginella tamariscina GNPS-based dereplication
This is a dataset used for the dereplication of selaginellin derivatives from Selaginella tamariscina.
ORGANISM(S): Selaginella Tamariscina (ncbitaxon:137178) 
2018-12-07 | MSV000083197 | GNPS
MetabolomicsGNPS - 40 Polyporaceae culture collection and extracts and fractions of the Cryptoporus volvatus fruiting bodies
This dataset contains LC-MS/MS raw data, and MZmine-processed mgf and quant files for 40 Polyporaceae culture collection, and Cryptoporus volvatus fruiting bodies extracts and fractions. Related publication will be added soon.
ORGANISM(S): Trametes Hirsuta (ncbitaxon:5327) Polyporus Tuberaster (ncbitaxon:38806) Coriolopsis Strumosa (ncbitaxon:655091) Datronia Mollis (ncbitaxon:40435) Trametes Gibbosa (ncbitaxon:160864) Neofavolus Alveolaris (ncbitaxon:1260784) Perenniporia Minutissima Trichaptum Biforme (ncbitaxon:50381) Daedaleopsis Confragosa (ncbitaxon:40433) Cerrena Consors (ncbitaxon:76333) Trametopsis Cervina (ncbitaxon:1111950) Nigroporus Vinosus (ncbitaxon:76128) Trametes Orientalis (ncbitaxon:252816) Cinereomyces Lindbladii (ncbitaxon:139102) Perenniporia Koreana (ncbitaxon:1586344) Fomes Fomentarius (ncbitaxon:40442) Skeletocutis Nivea (ncbitaxon:83254) Perenniporia Fraxinea (ncbitaxon:227965) Trametes Trogii Polyporus Arcularius (ncbitaxon:5639) Tyromyces Chioneus (ncbitaxon:83250) Phlebiopsis Castanea (ncbitaxon:1931348) Trametes Suaveolens (ncbitaxon:40454) Daedaleopsis Styracina (ncbitaxon:1840328) Microporus Vernicipes (ncbitaxon:158312) Cryptoporus Volvatus (ncbitaxon:40431) Neolentinus Lepideus (ncbitaxon:38799) Trichaptum Abietinum (ncbitaxon:40452) Pycnoporus Coccineus Polyporus Brumalis (ncbitaxon:139420) Phlebiopsis Gigantea (ncbitaxon:82310) Cerrena Aurantiopora (ncbitaxon:1611329) Lopharia Cinerascens (ncbitaxon:103381) Lenzites Betulinus (ncbitaxon:5632) Cerrena Unicolor (ncbitaxon:90312) Trametes Versicolor (ncbitaxon:5325) Perenniporia Subacida (ncbitaxon:81050) Microporus Affinis (ncbitaxon:252820) Daedaleopsis Tricolor (ncbitaxon:76330) Lenzites Styracina 
2020-08-18 | MSV000085974 | GNPS
ProteomicsStructural basis of amyloid fibril assembly by plant seed storage proteins
In this experiment, a single protein band excised from the gel was subjected to trypsin digestion, followed by mass spectrometry analysis for protein identification. Database searching was performed against a oat protein database.
ORGANISM(S): Avena sativa 
2026-05-06 | PXD072842 | Pride
Oat Lc-msms 
ProteomicsStructural basis of amyloid fibril assembly by plant seed storage proteins
In this experiment, a single protein band excised from the gel was subjected to trypsin digestion, followed by mass spectrometry analysis for protein identification. Database searching was performed against a rice protein database.
ORGANISM(S): Avena sativa 
2026-05-06 | PXD072885 | Pride
Lc-msms Rice 
ProteomicsStructural basis of amyloid fibril assembly by plant seed storage proteins
In this experiment, a single protein band excised from the gel was subjected to trypsin digestion, followed by mass spectrometry analysis for protein identification. Database searching was performed against a oat protein database.
ORGANISM(S): Avena sativa 
2026-05-06 | PXD072862 | Pride
Lc-msms Oat globulin fibril 
ProteomicsStructural basis of amyloid fibril assembly by plant seed storage proteins
In this experiment, a single protein band excised from the gel was subjected to trypsin digestion, followed by mass spectrometry analysis for protein identification. Database searching was performed against a oat protein database.
ORGANISM(S): Avena sativa 
2026-05-06 | PXD072948 | Pride
Lc-msms Oat seeds 
UnknownFine mapping of wheat stripe rust resistance gene Yr26 based on collinearity of wheat with Brachypodium distachyon and rice.
Not available
S-EPMC3589488 | biostudies-literature
MetabolomicsUntargeted Metabolomics of the enthesis interstitial fluid of wild-type and Nlrp3-/- mice with sham operation and injury post 7 days
In order to investigate the effect of the NLRP3 inflammasome on the regeneration of enthesis, we established an enthesis injury and repair model in wild-type and NLRP3-/- mice. The interstitial fluid of enthesis was extracted, and untargeted metabolomics was conducted to discover differential metabo...
2025-07-08 | MTBLS12150 | MetaboLights
UnknownCandidates for chemosensory genes identified in the Chinese citrus fly, Bactrocera minax, through a transcriptomic analysis.
Not available
S-EPMC6693287 | biostudies-literature
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