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MetabolomicsMetabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community; Kefir fermentation curve (FIA-MS)

Microbial communities often undergo intricate compositional changes yet also maintain stable coexistence of diverse species. The mechanisms underlying long-term coexistence remain unclear, as system-wide studies have been largely limited to engineered communities, ex situ adapted cultures, or syn...

2020-11-04 | MTBLS1829 | MetaboLights
MetabolomicsMetabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community; Interaction between the kefir isolates Lactococcus lactis and Acetobacter fabarum (GC-MS)

Microbial communities often undergo intricate compositional changes yet also maintain stable coexistence of diverse species. The mechanisms underlying long-term coexistence remain unclear, as system-wide studies have been largely limited to engineered communities, ex situ adapted cultures, or syn...

2020-11-04 | MTBLS1830 | MetaboLights
MetabolomicsMetabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community; Interaction between the kefir isolates Lactococcus lactis and Acetobacter (spent-medium assay, measured untargeted (FIA-qTOF) and targeted (HILIC, LC-MS)

Microbial communities often undergo intricate compositional changes yet also maintain stable coexistence of diverse species. The mechanisms underlying long-term coexistence remain unclear, as system-wide studies have been largely limited to engineered communities, ex situ adapted cultures, or syn...

2020-11-04 | MTBLS1823 | MetaboLights
TranscriptomicsMolecular interaction of bifidobacteria with kefir grains
We got insights into the B. bifidum PRL2010 genes whose expression resulted to be affected when bacterial cells were cultivated on kefir and kefiran as the unique carbon source. In order to exploit the transcriptome of PRL2010 grown on kefir and hefiran we performed global transcription profiling us...
ORGANISM(S): Bifidobacterium bifidum 
2016-07-03 | E-GEOD-50506 | biostudies-arrayexpress
ProteomicsKefir peptide profiling - Peptidomic analysis reveals proteolytic activity of kefir microorganisms on bovine milk proteins
This study examines the proteolytic activity of the kefir grains (a combination of bacteria and yeast) on bovine milk proteins. SDS-PAGE analysis reveals substantial digestion of milk proteins by the kefir grains in comparison with control samples. Mass spectrometric analysis reveals that the kefir ...
ORGANISM(S): Bos taurus (Bovine) 
2016-05-09 | PXD001826 | Pride
Kefir Peptide Protein Peptidomic Milk 
ProteomicsPeptide profiling of sheep milk kefir through peptidomic analysis at different fermentation times
In this study, we applied a proteomics strategy to identify peptides present in sheep milk kefir fermented at different times. We aimed to understand changes in the digestion pattern of milk proteins as well as to identify potential bioactive peptides.
ORGANISM(S): Ovis aries 
2023-08-20 | PXD044067 | Pride
Proteomics Biopeptides Fermented milk Sheep Peptidome Dairy 
Genomicswater kefir
Water Kefir Fermentation Time Series
PRJNA1023503 | ENA
GenomicsWater Kefir
Water Kefir Metagenomes
PRJNA977472 | ENA
ModelsBlasche2021 - Kefir interactions, Rothia kefirresidentii KRP
Genome-scale metabolic model of recently isolated kefir-associated bacterial species Rothia kefirresidentii KRP. See also https://github.com/cdanielmachado/kefir_paper, https://journals.asm.org/doi/full/10.1128/genomeA.00869-17
2024-05-15 | MODEL2204300002 | BioModels
FROG 
GenomicsKefir drinks
Kefir drinks Raw sequence reads
PRJNA822058 | ENA
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