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ProteomicsComparative Proteome Profiling of Susceptible anComparative Proteome Profiling of Susceptible and Resistant Rice Cultivars Identified an Arginase Involved in Rice Defense Against Xanthomonas oryzae pv. oryzae d Resistant Rice Cultivars Identified an Arginase Involved in Rice Defense Against Xanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae (Xoo), the causative agent of bacterial blight disease, is one of the major threats to rice productivity. Yet, the molecular mechanism of rice-Xoo interaction is elusive. Here, we report comparative proteome profiles of Xoo susceptible (Dongjin) and resistant (Hwayeong)...
ORGANISM(S): Oryza sativa subsp. japonica (Rice) 
2022-01-06 | PXD027569 | Pride
Proteomics Low-abundance proteins Bacterial blight disease Rice Arginase 
TranscriptomicsAnalysis of representative organ specific genes and promoters of rice using 3’ ORF oriented long oligomer microarray
The profiling was conducted with the Rice 3'-Tiling Microarray designed from 27,448 genes deposited at IRGSP, RAP1 database (http://rapdb.lab.nig.ac.jp). In this research, an array of 27,448 rice genes was used to elucidate the transcriptome of 7 tissues or organs of Oryza sativa L. cv. Dongjin incl...
ORGANISM(S): Oryza sativa 
2016-07-28 | E-GEOD-84903 | biostudies-arrayexpress
TranscriptomicsRNA sequencing of control and OsPRK1/2/3 triple knockout mutant in mature rice anthers (Oryza sativa japonica)
We created a triple loss-of-function/knockout mutant targeting three rice (Oryza sativa japonica) genes simultaneously via the Clustered Regularly Interspaced Short Palindromic Repeats(CRISPR)/Cas9 system. The three selected genes are as follows: OsPRK1 (LOC_Os08g40990), OsPRK2 (LOC_Os06g45240), and...
ORGANISM(S): Oryza sativa Japonica Group 
2025-07-14 | E-MTAB-13984 | biostudies-arrayexpress
UnknownDevelopment of In Situ Microfluidic System for Preparation of Controlled Porous Microsphere for Tissue Engineering.
Not available
S-EPMC9693177 | biostudies-literature
UnknownSynthesis of avenanthramides using engineered Escherichia coli.
Not available
S-EPMC5863376 | biostudies-literature
UnknownThe Rice Basic Helix-Loop-Helix 79 (OsbHLH079) Determines Leaf Angle and Grain Shape.
Not available
S-EPMC7139501 | biostudies-literature
UnknownRice OsMYB5P improves plant phosphate acquisition by regulation of phosphate transporter.
Not available
S-EPMC5864048 | biostudies-literature
TranscriptomicsH9 human embryonic stem cells, Neural Precursor Cells
Identify gene expression patterns of different neural precursor cells derived from human embryonic stem cells. The total of 12 samples were analyzed which could be grouped into 4 groups
ORGANISM(S): Homo sapiens 
2015-04-30 | E-GEOD-67383 | biostudies-arrayexpress
UnknownThe Auto-Regulation of ATL2 E3 Ubiquitin Ligase Plays an Important Role in the Immune Response against Alternaria brassicicola in Arabidopsis thaliana.
Not available
S-EPMC10889567 | biostudies-literature
TranscriptomicsRNA sequencing of Oryza sativa japonica control and OsRALF17/19 knockout mutant in mature rice anthers
Pollen tube growth is essential for successful fertilization and stable crop yields. We constructed loss-of-function/knock-out mutants that simultaneously target two rice genes using the CRISPR/Cas9 mutagenesis system. The selected OsRALF17 and OsRALF19 genes are strongly expressed in rice bicellula...
ORGANISM(S): Oryza sativa Japonica Group 
2023-09-29 | E-MTAB-12295 | biostudies-arrayexpress
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