Kim H J HJ - OmicsDI

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Unknown (2105)
Proteomics (51)
Genomics (31)
Transcriptomics (10)
Metabolomics (4)
Other (1)

Organisms

Schizophyllum commune H4-8 (49)
Mycobacterium tuberculosis SP7 (49)
Oryza sativa Japonica Group (49)
Crotalus durissus terrificus (49)
Eriocheir sinensis (49)
Candidatus Endoriftia persephonae (49)
Mycobacterium tuberculosis SP10 (49)
Mycobacterium tuberculosis SP13 (49)
Mycobacterium tuberculosis SP22 (49)
Enterobacter ludwigii (49)
Chlamydomonas reinhardtii (49)
Lama (49)
Pyricularia oryzae P131 (49)
Enterococcus mundtii CRL35 (49)
Pongo pygmaeus (49)
Oncorhynchus tshawytscha (49)
Pseudomonas canadensis (49)
Strongylocentrotus purpuratus (49)
Influenza A virus (A/California/04/2009(H1N1)) (49)
Salmonella enterica subsp. enterica serovar Typhimurium (49)
Homo (49)
Bradyrhizobium diazoefficiens (49)
Streptococcus pyogenes STAB901 (49)
Pseudomonas aeruginosa PAO1H2O (49)
Megoura viciae (49)
Human alphaherpesvirus 1 strain 17 (49)
Quercus petraea (49)
Homo sapiens (38)
Mus musculus (2)
Zea mays (1)

Repository

pride (49)
EGA (29)
biostudies-arrayexpress (12)
MetaboLights (4)
MassIVE (2)
GPMDB (1)

Tissue

Cell culture (9)
Brain (5)
Blood plasma (3)
Epithelial cell (3)
Lymph node (2)
Stem cell (2)
Kidney (2)
Liver (2)
Lymphatic vessel endothelium (1)
Forebrain (1)
Nasal epithelium (1)
Neoplastic (1)
Skin of body (1)
Tibia (1)
Tail (1)
Mammary gland (1)
Osteoblast (1)
HEK-293T cell (1)
Melanocyte (1)
Permanent cell line cell (1)
Urine (1)
Skin (1)
Neuronal stem cell (1)
Stomach (1)
Breast (1)
Placenta (1)
Keratinocyte (1)
Embryonic stem cell (1)
Embryo (1)

Disease

Brain glioblastoma multiforme (2)
Melanoma (2)
Breast cancer (2)
Not Available (1)
Congenital heart disease (1)
Stomach cancer (1)
Hepatocellular carcinoma (1)
Severe acute respiratory syndrome (1)
Pancreatic ductal adenocarcinoma (1)
Parkinson's disease (1)

Technology Type

Mass Spectrometry (49)
Shotgun proteomics (23)
Bottom-up proteomics (15)
Gel-based experiment (8)
Data-dependent acquisition (7)
Mass spectrometry (3)
Affinity purification coupled with mass spectrometry proteomics (3)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Q Exactive (2)
Instrument (1)
LTQ Orbitrap Velos Pro (1)
Nuclear Magnetic Resonance (NMR) (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2025 (13)
2023 (7)
2026 (7)
2024 (5)
2020 (5)
2013 (4)
2016 (3)
2011 (3)
2022 (3)
2019 (3)
2021 (3)
2018 (3)
2009 (2)
2017 (2)
2012 (1)
2010 (1)
2015 (1)
2014 (1)

CHEBI ID

CHEBI:15354 (4)
CHEBI:6650 (3)
CHEBI:15741 (3)
CHEBI:29016 (3)
CHEBI:18186 (3)
CHEBI:27897 (3)
CHEBI:25017 (3)
CHEBI:17148 (2)
CHEBI:73635 (2)
CHEBI:73514 (2)
CHEBI:30865 (2)
CHEBI:17754 (2)
CHEBI:28757 (2)
CHEBI:16742 (2)
CHEBI:15724 (2)
CHEBI:68830 (2)
CHEBI:30915 (2)
CHEBI:27471 (2)
CHEBI:36274 (2)
CHEBI:16695 (2)
CHEBI:16708 (2)
CHEBI:15756 (2)
CHEBI:16761 (2)
CHEBI:17822 (2)
CHEBI:15428 (2)
CHEBI:17234 (2)
CHEBI:30769 (2)
CHEBI:28300 (2)
CHEBI:26271 (2)
CHEBI:16449 (2)

Metabolite Name

Putrescine (2)
Trimethylamine N-oxide (2)
Inosine (2)
Glycerol (2)
Choline (2)
Fructose (2)
Malate (2)
Succinate (2)
Lactate (2)
Glucose (2)
Valine (2)
Proline (2)
Glutamine (2)
Arginine (2)
Alanine (2)
Methionine (2)
Threonine (2)
Serine (2)
Glycine (2)
Isoleucine (2)
Tyrosine (2)
Leucine (2)
Phenylalanine (2)
Tryptophan (2)
4-quinolinecarboxylic acid (1)
Leu-Lys-Pro (1)
Lys-Val-Asn (1)
Glu-Pro-Pro (1)
Ala-Val-Asp-Pro (1)
Pro-Ser-Ser (1)

Study type

Transcription profiling by array (7)
Comparative genomic hybridization by array (2)
ChIP-seq (2)
Unknown experiment type (1)

Release Date

2025 (273)
2023 (256)
2021 (232)
2024 (220)
2022 (211)
2020 (184)
2018 (135)
2019 (132)
2015 (92)
2016 (91)
2017 (90)
2014 (53)
2026 (47)
2013 (38)
2012 (23)
2011 (14)
2010 (8)
2009 (5)
2008 (4)
2006 (4)
2007 (2)
2005 (1)
2002 (1)
2001 (1)

Lab affiliation

The University of Melbourne (4)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (3)
Department of Cell and Molecular Biology, St. Jude Children’s Research Hospital, Memphis, TN 38105, USA. (2)
1Center for Cardiovascular Regeneration, Department of Cardiovascular Sciences, Houston Methodist Research Institute. Houston Methodist, 6550 Fannin Street, Texas 77030, USA. (1)
Yonsei Proteome Research Center, Yonsei University, Seoul, Korea (1)
Korea institute of science and technology, Doping control center, Seoul, S,Korea (1)
Department of Life Sciences and Division of Integrative Biosciences and Biotechnology Pohang University of Science and Technology Pohang 790-784, Republic of Korea (1)
Biomedical Omics Research, Korea Basic Science Institute, Cheongju, Korea (1)
Korea Advanced Institute of Sciences and Technology (KAIST) (1)
Therapeutics & Biotechnology Division, Korea Research Institute of Chemical Technology, Daejeon 34114, Republic of Korea (1)
Department of Biochemistry, College of Life Science and Technology, Institute for Bio-medical Convergence Science and Technology, Yonsei University, Seoul, Republic of Korea (1)
The Univeristy of Melbourne (1)
School of Biological Sciences, Seoul National University, Seou, 08826, Korea (1)
Group for Biometrology, Korea Research Institute of Standards and Science (KRISS), Daejeon, 34113, Republic of Korea (1)
Department of Internal Medicine, School of Medicine, Kyungpook National University, Kyungpook National University Hospital, Daegu, Republic of Korea (1)
Principal investigator at Lund University (1)
L7235, Center for Theragnosis, Korea Institute of Science and Technology, Republic of Korea (1)
Center for Plant Aging Research, Institute for Basic Science, and Department of New Biology, Daegu Gyeongbuk Institute of Science and Technology, Daegu 42988, Republic of Korea (1)
Yonsei Proteome Research Center, Yonsei University (1)
Department of Biological Sciences, KAIST (1)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea (1)
Department of Microbiology, College of Medicine, Hallym University, Chuncheon, Republic of Korea (1)
Member Cell and Molecular Biology Department St. Jude Children's Research Hospital Memphis, TN-38105 (1)
Department of Biological Sciences, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, 34141, South Korea KAIST Stem Cell Center, KAIST, Daejeon 34141, South Korea (1)
Department of Pharmacology Yonsei University College of Medicine (1)
Member Cell&Molecular Biology Department St.Jude Children's Research Hospital Memphis, TN-38105 (1)
Molecular Neurobiology Laboratory, Department of Psychiatry and McLean Hospital, Harvard Medical School (1)
Proteomics and Metabolomics Core Facility, Biomedical Research Institute, Seoul National University Hospital (1)
1 Department of Genetics, Harvard Medical School, Boston, MA 02115 (1)
Division of Clinical Protein Science & Imaging, Department of Clinical Sciences (Lund), Department of Biomedical Engineering, Lund University, Lund, Sweden (1)

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FGF21 induced by carbon monoxide mediates metabolic homeostasis via the PERK/ATF4 pathway.

Not available

S-EPMC5901375 | biostudies-literature

The histone demethylase KDM5A is required for the repression of astrocytogenesis and regulated by the translational machinery in neural progenitor cells.

Not available

S-EPMC6266631 | biostudies-literature

Differentiation of Mycobacterial species by hsp65 duplex PCR followed by duplex-PCR-based restriction analysis and direct sequencing.

Not available

S-EPMC1698348 | biostudies-literature

Role of jeotgal, a Korean traditional fermented fish sauce, in microbial dynamics and metabolite profiles during kimchi fermentation

We investigated the effects of jeotgal (fermented fish sauce) on kimchi fermentation, with or without saeu-jeot and myeolchi-jeot. Bacterial community analysis showed that Leuconostoc, Weissella, Lactobacillus, and Tetragenococcus were the dominant genera; however, their succession depended on the p...

2019-02-07 | MTBLS654 | MetaboLights

Therapeutic Potential of a Novel Necrosis Inhibitor, 7-Amino-Indole, in Myocardial Ischemia-Reperfusion Injury.

Not available

S-EPMC5959205 | biostudies-literature

Lacrimispora sanguinis sp. nov., isolated from human blood.

Not available

S-EPMC12578346 | biostudies-literature

Vibrational Properties of h-BN and h-BN-Graphene Heterostructures Probed by Inelastic Electron Tunneling Spectroscopy.

Not available

S-EPMC4643226 | biostudies-literature

Human LMO2 binding protein LC-MSMS in U87MG(Glioblastoma cell)

To identify the binding partner of LMO2 for explanation of STAT3 signal-related protein in human glioblastoma

ORGANISM(S): Homo sapiens (Human)

2022-08-11 | PXD028254 | Pride

Proteomic analysis of breast cancer based on immune subtypes

Immunotherapy is applied to breast cancer to resolve the limitations of survival gain in existing treatment modalities. With immunotherapy, a tumor can be classified into immune-inflamed, excluded and desert based on the distribution of immune cells. We assessed the clinicopathological features, eac...

ORGANISM(S): Homo sapiens (Human)

2024-06-16 | PXD043902 | Pride

Ffpe Proteome Lfq Breast cancer Immune subtype

Identification of the acetylated lysine residues of Dnmt3L protein in murine embryonic stem cells

The core purpose of this project is to identify the novel epigenetic factors which play a crucial role on regulating stem cells developed from embryo development to ageing through the longitudinal analysis of their transcriptome, protein interactome, and post- translational modification network. Thu...

ORGANISM(S): Mus musculus (Mouse)

2025-05-26 | PXD032953 | Pride

Dna methyltransferases (dnmts) Embryonic stem cell (esc) Gel-lc-ms/ms Mus musculus (mouse) Proteome Acetylation

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