Kim Jin J - OmicsDI

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Unknown (1122)
Proteomics (59)
Genomics (56)
Transcriptomics (27)
Metabolomics (12)
Other (3)

Organisms

Homo sapiens (68)
Andropogon gerardi (25)
Bacteria (25)
Canis lupus familiaris (25)
Clostridium perfringens (25)
Cnidaria (25)
Cricetulus griseus (25)
Eukaryota (25)
Fasciola (25)
Hepatitis B virus (25)
Human betaherpesvirus 5 (25)
Madurella mycetomatis (25)
Mesocricetus auratus (25)
Miscanthus x giganteus (25)
Mus musculus (25)
Mycobacterium tuberculosis (25)
Orthoflavivirus (25)
Panicum virgatum (25)
Platyhelminthes (25)
Pseudomonas aeruginosa AES-1R (25)
Rattus norvegicus (25)
Mus musculus (9)
Brassica oleracea (1)
Neisseria meningitidis (1)
Caenorhabditis elegans (1)
Pseudomonas aeruginosa (1)
Escherichia coli (1)
Gallus gallus (1)
Drosophila melanogaster (1)
Arabidopsis thaliana (1)

Repository

EGA (50)
biostudies-arrayexpress (33)
pride (25)
PAXDB (21)
MassIVE (9)
GNPS (6)
MetaboLights (6)
GPMDB (3)
PanoramaPublic (2)
PeptideAtlas (2)

Tissue

Cell culture (4)
Ascites (2)
Brain (2)
Breast (2)
Anther (1)
Blood (1)
Blood plasma (1)
Blood serum (1)
Breast cancer cell line (1)
CT-26 cell (1)
Colon epithelial cell (1)
Epithelial cell (1)
Fibroblast (1)
Heart (1)
Kidney (1)
Lung (1)
Microglial cell (1)
Placenta (1)
Stem cell (1)
T cell (1)

Disease

Not Available (3)
Stomach cancer (3)
Breast cancer (2)
Disease free (2)
Breast secretory carcinoma (1)
Cardiovascular system disease (1)
Colorectal carcinoma (1)
Coronavirus infectious disease (1)
Pancreatic ductal adenocarcinoma (1)

Technology Type

Mass Spectrometry (25)
Shotgun proteomics (11)
Bottom-up proteomics (7)
Mass spectrometry (6)
Data-dependent acquisition (5)
Gel-based experiment (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (1)
Affinity proteomics (1)
Data-independent acquisition (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Agilent GC 7890A coupled with a single quadrupole MSD 5975C (5)
LTQ Velos ETD (5)
Instrument (3)
Liquid Chromatography MS - negative - reverse phase (3)
Illumina HiSeq 2000 (2)
LTQ Orbitrap Velos (2)
Orbitrap Eclipse (2)
Q Exactive (2)
Liquid Chromatography MS - positive - reverse phase (2)
QExactive (2)
Python (1)
Nugen Ovation SPIA; Wafergen’s Apollo liquid handler; KAPA Hyper Prep Library Kit (1)
QIAGEN TissueLyser II (1)
Isoflurane euthanasia chamber (1)
HPC services from the University of Granada (http://alhambra.ugr.es) (1)
Xevo G2 Q-Tof (1)
LTQ FT (1)
LTQ Orbitrap (1)
Orbitrap Fusion (1)
Synapt G2-S HDMS (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
5975C Series GC/MSD (Agilent) (1)
MS Imaging - (1)

Publication Date

2015 (19)
2014 (9)
2013 (9)
2018 (8)
2016 (7)
2008 (6)
2020 (6)
2025 (6)
2022 (5)
2023 (4)
2011 (3)
2010 (3)
2019 (3)
2024 (3)
2017 (3)
2026 (2)
2007 (2)
2021 (2)
2009 (1)

UNIPROT ID/AC

9544.ENSMMUP00000000740 (19)
9544.ENSMMUP00000001377 (19)
9544.ENSMMUP00000001769 (19)
9544.ENSMMUP00000001915 (19)
9544.ENSMMUP00000002527 (19)
9544.ENSMMUP00000002781 (19)
9544.ENSMMUP00000003585 (19)
9544.ENSMMUP00000003611 (19)
9544.ENSMMUP00000004046 (19)
9544.ENSMMUP00000004823 (19)
9544.ENSMMUP00000005597 (19)
9544.ENSMMUP00000005753 (19)
9544.ENSMMUP00000005797 (19)
9544.ENSMMUP00000005910 (19)
9544.ENSMMUP00000006390 (19)
9544.ENSMMUP00000006423 (19)
9544.ENSMMUP00000007902 (19)
9544.ENSMMUP00000008373 (19)
9544.ENSMMUP00000008494 (19)
9544.ENSMMUP00000008956 (19)
9544.ENSMMUP00000009144 (19)
9544.ENSMMUP00000009462 (19)
9544.ENSMMUP00000009900 (19)
9544.ENSMMUP00000010357 (19)
9544.ENSMMUP00000010407 (19)
9544.ENSMMUP00000010774 (19)
9544.ENSMMUP00000010832 (19)
9544.ENSMMUP00000010920 (19)
9544.ENSMMUP00000011307 (19)
9544.ENSMMUP00000011868 (19)

ENSEMBL ID

ENSMUSG00000021039 (2)
ENSMUSG00000027651 (2)
ENSMUSG00000090272 (2)
ENSMUSG00000098557 (2)
ENSMUSP00000141097 (2)
ENSMUSP00000141637 (2)
ENSMUSP00000140201 (1)
ENSMUSP00000141542 (1)

CHEBI ID

CHEBI:77131 (2)
CHEBI:36281 (2)
CHEBI:64525 (2)
CHEBI:66848 (2)
CHEBI:18186 (2)
CHEBI:167113 (1)
CHEBI:167112 (1)
CHEBI:166639 (1)
CHEBI:79318 (1)
CHEBI:27506 (1)
CHEBI:79087 (1)
CHEBI:145096 (1)
CHEBI:5353 (1)
CHEBI:136075 (1)
CHEBI:132538 (1)
CHEBI:8878 (1)
CHEBI:75456 (1)
CHEBI:91039 (1)
CHEBI:72534 (1)
CHEBI:72533 (1)
CHEBI:85762 (1)
CHEBI:83893 (1)
CHEBI:72528 (1)
CHEBI:72523 (1)
CHEBI:72519 (1)
CHEBI:72518 (1)
CHEBI:72527 (1)
CHEBI:72514 (1)
CHEBI:74349 (1)
CHEBI:88697 (1)

Metabolite Name

Sinapic acid (2)
Caffeic acid (2)
Beta-D-Glucosyl-2-hydroxycinnamate (1)
Rhamnegin (1)
Quercetin-3-neohesperidoside-7-rhamnoside (1)
Kaempferol 3-O-beta-D-rhamninoside (1)
Isorhamnetin-3-O-rutinoside (1)
Cis-2-Hydroxycinnamate (1)
Kaempferol-7-O-neohesperidoside (1)
Naringenin chalcone (1)
PC(18:1/20:1) (1)
PC(16:1/18:2) (1)
P-Coumaric acid (1)
Robinin (1)
P-coumaric acid (=4-hydroxycinnamic acid) (1)
Provitamin C (=2-keto-D-gluconic acid) (1)
M-coumaric acid (1)
5-oxo-proline (pyroglutamic acid) (1)
Glycerol monostearate (1)
1-monopalmitin (1)
Inositol-1-phosphate (1)
P-Coumaraldehyde (1)
N-(phenylacetyl) aspartic acid (1)
Trans-2-Hydroxycinnamate (1)
LysoPE 18:0 (1)
Eicosenoic acid (1)
PI 38:3 (1)
PE 38:4 (1)
PE 36:2 (1)
PE 34:2 (1)

Study type

Transcription profiling by array (14)
ChIP-seq (6)
Comparative genomic hybridization by array (3)
RNA-seq of coding RNA (3)
ChIP-chip by tiling array (2)
Transcription profiling by MPSS (1)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (145)
2023 (120)
2024 (118)
2021 (116)
2020 (97)
2022 (96)
2018 (62)
2016 (59)
2014 (53)
2019 (53)
2015 (53)
2017 (52)
2013 (29)
2026 (25)
2012 (21)
2011 (20)
2010 (11)
2008 (7)
2009 (6)
2007 (5)
2006 (3)
2005 (2)
2004 (1)
2003 (1)

Lab affiliation

Proteomics core facility, Seoul National University Hospital (3)
Proteomics Core Facility, Biomedical Research Institute, Seoul National University Hospital (2)
Associate Professor of Biochemistry & Molecular Biology, Director Proteomics Core, Indiana University School of Medicine (1)
Biomedical Research Institute ,Seoul National University Hospital (1)
Colleage of Medicine, Seoul National University Seoul National University Hospital (1)
College of Animal Science, Jilin University, China (1)
Department of Biotechnology, Stem cell and biomaterial engineering Lab, Yonsei University, Republic of Korea. (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF) San Francisco, CA 94158 USA (1)
Department of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany (1)
Department of Life Science and Environmental Biochemistry, Life and Industry Convergence Research Institute, Pusan National University, Miryang 50463, Republic of Korea (1)
Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology and College of Medicine or College of Pharmacy, Seoul National University, Republic of Korea. (1)
Human Immunological Diseases Section, Laboratory of Clinical Immunology and Microbiology, Division of Intramural Research, NIAID, NIH, Department of Health and Human Services, Unites States Government (1)
Keck MS & Proteomics Resource Yale School of Medicine (1)
Korea Basic Science Institute (1)
Kyungpook national university (1)
Nanobio Measurement Group, Division of Biomedical Metrology, Korea Research Institute of Standards and Science (KRISS), Daejeon 34113, Republic of Korea (1)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (1)
School of Pharmaceutical Sciences, Key Laboratory of Biotechnology Pharmaceutical Engineering, Wenzhou Medical University, Wenzhou, Zhejiang, P. R. China (1)
Therapeutics & Biotechnology Division, Korea Research Institute of Chemical Technology, Daejeon 34114, Republic of Korea (1)
Washington University, Department of Medicine, Division of Pulmonary and Critical Care (1)
Yonsei Proteome Research Center (1)
Yonsei Proteome Research Center, Yonsei University (1)

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Switchable S = 1/2 and J = 1/2 Rashba bands in ferroelectric halide perovskites.

Not available

S-EPMC4024856 | biostudies-literature

Spontaneous seizure and partial lethality of juvenile Shank3-overexpressing mice in C57BL/6 J background.

Not available

S-EPMC6180595 | biostudies-literature

Gene-diet interactions in gastric cancer risk: a systematic review.

Not available

S-EPMC4110595 | biostudies-literature

The complete chloroplast genome sequence of Melampyrum koreanum (Orobanchaceae), an endemic and hemi-parasitic herb in Korea.

Not available

S-EPMC8510606 | biostudies-literature

Biochemical analysis of the human mismatch repair proteins hMutSα MSH2(G674A)-MSH6 and MSH2-MSH6(T1219D).

Not available

S-EPMC3323011 | biostudies-literature

Integrative and comparative genomic analysis of lung squamous cell carcinomas in East Asian patients.

Not available

S-EPMC4062710 | biostudies-literature

OsRALF17/19 activates ROS signaling through OsMTD2 to modulate pollen tube growth in Oryza sativa

- Pollen tube growth is important process for successful double fertilization, which is critical for grain yield in crop plants. Despite much progress in identification of rapid alkalization factors (RALFs) which serve as ligand for signaling transduction during fertilization in Arabidopsis, there i...

ORGANISM(S): Oryza sativa subsp. japonica (Rice)

2023-09-21 | PXD037597 | Pride

Mm_Microglia_highPH

Mouse BV-2 microglial proteome

ORGANISM(S): Mus Musculus

2013-12-31 | PAe005146 | PeptideAtlas

CGH result of Neisseria meningitidis ST-7 isolates

Neisseria meningitidis is a major cause of bacterial meningitis and septicemia worldwide. Seven new serogroup C meningococci were isolated from two provinces of China in January, 2006. Their PorA VR types were P1.20, 9. Multilocus sequence typing results indicated that they all belonged to ST-7. It ...

ORGANISM(S): Neisseria meningitidis

2007-10-10 | E-GEOD-7331 | biostudies-arrayexpress

Vitamin D deficiency is associated with inferior survival of patients with extranodal natural killer/T-cell lymphoma.

Not available

S-EPMC6272114 | biostudies-literature

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1279 Results

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