Krause P P - OmicsDI

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Unknown (1196)
Transcriptomics (64)
Proteomics (46)
Genomics (7)
Metabolomics (5)
Other (1)

Organisms

Homo sapiens (46)
Mus musculus (35)
Caenorhabditis elegans (7)
Rattus norvegicus (3)
Drosophila melanogaster (3)
Corynebacterium glutamicum (2)
Sus scrofa domesticus (2)
Pan troglodytes (1)
Chlamydomonas reinhardtii (1)
Corynebacterium glutamicum ATCC 13032 (1)
Sus scrofa (1)
Arabidopsis thaliana (1)
Danio rerio (1)
Human alphaherpesvirus 1 strain 17 (1)
Human alphaherpesvirus 1 strain KOS (1)
Human herpesvirus 2 strain 186 (1)
Myotis lucifugus (1)

Repository

biostudies-arrayexpress (69)
pride (38)
MassIVE (8)
MetaboLights (5)
EGA (4)
GPMDB (1)

Tissue

Cell culture (7)
T cell (5)
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Brain (3)
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Blood (1)
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Lung (1)
Plant cell (1)
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Stem cell (1)

Disease

Acute leukemia (3)
Duchenne muscular dystrophy (2)
Lymphoma (1)
Osteosarcoma (1)
Not Available (1)
Prostate cancer (1)
Severe acute respiratory syndrome (1)
Urticaria (1)

Technology Type

Mass Spectrometry (38)
Shotgun proteomics (21)
Bottom-up proteomics (6)
Data-dependent acquisition (6)
Mass spectrometry (5)
Affinity purification coupled with mass spectrometry proteomics (5)
Gel-based experiment (5)
Data-independent acquisition (2)
Affinity proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
SWATH MS (1)

Instrument Platform

Orbitrap Fusion Lumos (3)
Impact (2)
Q Exactive (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - positive - reverse phase (2)
ScanArray Express HT [PerkinElmer] (1)
Instrument (1)
LTQ Orbitrap Elite (1)
Orbitrap Fusion ETD (1)
6540 Q-TOF LC/MS (Agilent) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2015 (20)
2014 (11)
2023 (11)
2013 (10)
2012 (8)
2016 (7)
2008 (6)
2018 (5)
2010 (5)
2025 (5)
2022 (5)
2024 (5)
2020 (5)
2009 (4)
2019 (4)
2017 (3)
2021 (3)
2026 (3)

CHEBI ID

CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:15978 (2)
CHEBI:16010 (2)
CHEBI:16449 (2)
CHEBI:16995 (2)
CHEBI:17268 (2)
CHEBI:17490 (2)
CHEBI:17754 (2)
CHEBI:17822 (2)
CHEBI:18186 (2)
CHEBI:22653 (2)
CHEBI:25017 (2)
CHEBI:27266 (2)
CHEBI:27897 (2)
CHEBI:28044 (2)
CHEBI:28300 (2)
CHEBI:28842 (2)
CHEBI:30769 (2)
CHEBI:6650 (2)
CHEBI:116314 (1)
CHEBI:131886 (1)
CHEBI:131887 (1)
CHEBI:132968 (1)
CHEBI:1372 (1)
CHEBI:138126 (1)
CHEBI:139305 (1)
CHEBI:142245 (1)
CHEBI:144043 (1)

Metabolite Name

Alanine (2)
Asparagine (2)
Glutamine (2)
Glycerol (2)
Glycine (2)
Isoleucine (2)
Leucine (2)
Oxalic acid (2)
Phenylalanine (2)
Phosphate (2)
Serine (2)
Succinic acid (2)
Threonine (2)
Tryptophan (2)
Tyrosine (2)
Valine (2)
1-dimethylisopropylsilyloxy-3-methylbut-2-ene (1)
1-monolinoelylpalmitin (1)
1-monopalmitin (1)
13-(Z)-Docosenamide (1)
2,4-dihydroxybutyric acid (1)
2-Oxoadipate (1)
2-adipic acid (1)
2-hydroxyisocaproic_acid (1)
2-keto-l-gluconic_acid (1)
2-ketoisovaleric acid (1)
2-methoxyhydroquinone (1)
2-methylbutyric acid (1)
3-Methyl-2-oxovaleric acid (1)
3-O-caffeoyl-quinic acid (1)

Study type

Transcription profiling by array (55)
RNA-seq of coding RNA (4)
Comparative genomic hybridization by array (2)
Methylation profiling by high throughput sequencing (2)
Other (1)
ChIP-seq (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)

Release Date

2021 (139)
2022 (138)
2023 (124)
2024 (122)
2025 (112)
2020 (100)
2018 (68)
2019 (68)
2015 (66)
2016 (55)
2014 (50)
2017 (45)
2013 (39)
2012 (32)
2026 (24)
2011 (21)
2010 (15)
2008 (15)
2009 (13)
2007 (6)
2006 (4)
2003 (3)
2000 (3)
2004 (2)
2005 (1)

Lab affiliation

Goethe-Universität Frankfurt, Georg-Speyer-Haus, Paul-Ehrlich-Str. 42-44, Frankfurt am Main, GERMANY (3)
Department Molecular Toxicology, Helmholtz Centre for Environmental Research GmBH - UFZ (2)
Department of Chemistry, Imperial College London, Exhibition Road, London SW7 2AZ, UK (2)
Department of Pharmaceutical Sciences, Leslie Dan Faculty of Pharmacy, University of Toronto (2)
Group Leader, Quattrocolo Lab, Kavli Institute for Systems Neuroscience and Centre for Neural Computation, Norwegian University of Science and Technology (NTNU), Trondheim 7491, Norway (2)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (1)
Center for Translational Research and Molecular Biology of Cancer, Maria Sklodowska-Curie National Research Institute of Oncology Gliwice Branch, Gliwice, Poland (1)
Charite Universitaetsmedizin Berlin, Department of Dermatology and Allergy; Autoinflammation Reference Center (ARC2) (1)
Charité-Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Institute of Pharmacology, 10115 Berlin, Germany (1)
Departement of Molecular and Cell Biology, University of Geneva, Geneva, Switzerland (1)
Department of Biology University of Copenhagen Denmark (1)
Department of Cellular Molecular Pharmacology, University of California San Francisco, 1700 4th Street, San Francisco, CA 94158 (1)
Department of Chemistry, Imperial College London (1)
Department of Developmental and Molecular Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA (1)
Department of Developmental and Molecular Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA. (1)
Department of Redox Metabolism, Institute of Biochemistry, University of Cologne, Cologne, Germany (1)
Département de Biologie Moléculaire et Cellulaire, Université de Genève (1)
ETH Zürich Institute of Molecular Systems Biology Otto-Stern-Weg 3 8093 Zürich Switzerland (1)
Freie Universität Berlin, Institut für Chemie und Biochemie, Thielallee 63, Berlin, 14195, Germany (1)
Globe Institute, University of Copenhagen, Denmark (1)
Insitute for Cardiovascular Physiology, Goethe University, Frankfurt, Germany (1)
Institute for Systems Biology (1)
Laboratory for Functional Genome Analysis Genzentrum Ludwig-Maximilians-Universität München Feodor-Lynen-Str. 25 D-81377 München Germany (1)
Leibniz Institute for Zoo and Wildlife Research (1)
Ludwig-Maximilians-Universität München Genzentrum Laboratory for Functional Genome Analysis Feodor-Lynen-Str. 25 D-81377 München (1)
Max Planck Institute for the Science of Human History (1)
Molecular Biology Division, Biomedical Center, Ludwig-Maximilians-University, Munich, Germany (1)
Prof. Dr. Henning Urlaub Max-Planck-Institute for Biophysical Chemistry Bioanalytical Mass Spectrometry Group Am Fassberg 11 D-37077 Goettingen, Germany University Medical Center Goettingen Bioanalytics Institute for Clinical Chemistry Robert Koch Strasse 40 D-37075 Goettingen, Germany (1)
Proteome Research (AG Stühler) Institute of Molecular Medicine Heinrich Heine University Düsseldorf Universitätsstraße 1 40225 Düsseldorf Germany (1)
Systematic Proteome Research & Bioanalytics, Institute for Experimental Medicine, Christian-Albrechts-Universität zu Kiel, Kiel, Germany (1)

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Phosphoethanolamine-N-methyltransferase is a potential biomarker for the diagnosis of P. knowlesi and P. falciparum malaria.

Not available

S-EPMC5837800 | biostudies-literature

Alternatively-Activated Macrophages Upregulate Mesothelial Expression of P-Selectin to Enhance Adhesion of Ovarian Cancer Cells.

Not available

S-EPMC6030435 | biostudies-literature

Characterization of the Gut-Associated Microbiome in Inflammatory Pouch Complications Following Ileal Pouch-Anal Anastomosis

This study involved evaluation of the tissue associated microbiome of the ileal pouch following surgery for ulcerative colitis (UC) or familial adenomatous polyposis (FAP). Individuals were recruited, with biopsies taken from the ileal pouch and the pre-pouch ileum, microbial DNA was extracted an...

phs000659.v1.p1 | EGA

Roles of Hydrogen Bonding in Proton Transfer to κ^P,κ^N,κ^P-N(CH₂CH₂P ⁱ Pr₂)₂-Ligated Nickel Pincer Complexes.

Not available

S-EPMC6045406 | biostudies-literature

Proteomic profile of hippocampal growth cones through early postnatal development

During early postnatal development, hippocampal circuits are assembled through the coordinated navigation of axonal growth cones toward their synaptic targets. While growth cones are known to rely on local proteomic changes to interpret guidance cues, the developmental dynamics of their proteomic co...

ORGANISM(S): Mus musculus (Mouse)

2026-06-11 | PXD076616 | Pride

proteomic analysis of leukocytes upon Plekhm1-KO

Leukemia cells instruct their surrounding bone marrow microenvironment (BMM) rendering it hospitable to leukemia cell survival. Conversely, how cells of the BMM influence leukemia progression is less well understood. Pleckstrin homology domain family M member 1 (PLEKHM1) serves as a hub between fusi...

ORGANISM(S): Mus musculus (Mouse)

2023-01-16 | PXD027044 | Pride

Sps-ms3 Tmt Mesenchymal stromal cells Mouse Orbitrap lumos

Proteomics of MSC-derived exosomes upon Plekhm1-KO

ORGANISM(S): Mus musculus (Mouse)

2023-01-16 | PXD027041 | Pride

Exosome Mesenchymal stromal cells Lfq Qexactive hf

Proteome analysis of AML cells upon CaSR-KO

Haematopoietic stem cells (HSC) reside in locations within the bone marrow microenvironment (BMM) featuring a slightly higher extracellular calcium ion concentration [eCa2+]. HSC respond to [eCa2+] via the G-protein coupled calcium-sensing receptor (CaSR), but the role of CaSR for leukaemia and leuk...

ORGANISM(S): Mus musculus (Mouse)

2023-10-24 | PXD035937 | Pride

Mouse Tmt Proteome Aml

Thermal Conductivity and Electrical Resistivity of Melt-Mixed Polypropylene Composites Containing Mixtures of Carbon-Based Fillers.

Not available

S-EPMC6630210 | biostudies-literature

Postnatal persistence of hippocampal Cajal-Retzius cells has a critical role in the establishment of the hippocampal circuit

Cajal-Retzius (CR) cells are a transient neuron type that populate the postnatal hippocampus. The role of transient cell types and circuits have been vastly addressed in neocortical regions, but poorly studied in the hippocampus. To understand how CR cells persistence influences the maturation of hi...

ORGANISM(S): Mus musculus (Mouse)

2024-05-24 | PXD042517 | Pride

Cajal-retzius cells Hippocampus Ca1 slm Viral vector injection Development Cell ablation Brain tissue Transgenic mouse line Hippocampal circuit Lc-ms/ms

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