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ProteomicsTissue-specific proteome of L4 larvae of Anisakis simplex s. s.
The tissue-specific proteome of L4 larvae of Anisakis simplex s. s. with use of TMT labelling
ORGANISM(S): Anisakis Simplex (ncbitaxon:6269) 
2021-12-02 | MSV000088491 | MassIVE
TranscriptomicsTranscription profiling of S. cerevisiae grown in acetate, ethanol and maltose limited conditions to investigate transcriptional regulation in controlling fluxes in central carbon metabolism
In contrast to batch cultivation, chemostat cultivation allows the identification of carbon source responses without interference by carbon-catabolite repression, accumulation of toxic products, and differences in specific growth rate. This study focuses on the yeast Saccharomyces cerevisiae, grown ...
ORGANISM(S): Saccharomyces cerevisiae 
2008-06-16 | E-GEOD-8895 | biostudies-arrayexpress
UnknownStructure and assembly of the S-layer in C. difficile.
Not available
S-EPMC8881574 | biostudies-literature
TranscriptomicsSMF-ONT S2 clamp RNAi knockdown
Collection of 2 biological replicates of SMF-ONT performed in S2 cell incubated for 72hrs with RNAi targeting Clamp or LacZ (ctrl) transcripts. The footprinting protocol was adapted from Kleinendorst and Barzaghi et al., 2021 and optimised for long-read sequencing and high weight DNA extraction. In...
ORGANISM(S): Drosophila melanogaster 
2026-08-04 | E-MTAB-17018 | biostudies-arrayexpress
ProteomicsProteome-wide quantitative multiplexed profiling of protein expression: Carbon source dependency in S. cerevisiae
The global proteomic alterations in the budding yeast Saccharomyces cerevisiae due to differences in carbon sources can be comprehensively examined using mass spectrometry-based multiplexing strategies. Here we investigate changes in the S. cerevisiae proteome resulting from cultures grown in minima...
ORGANISM(S): Saccharomyces Cerevisiae (ncbitaxon:4932) 
2020-01-30 | MSV000084868 | MassIVE
TranscriptomicsTranscription profiling of S. cerevisiae xylose metabolism mutants grown on glucose and xylose under aerobic and anaerobic conditions
Response of Saccharomyces cerevisiae engineered for xylose metabolism to changes in carbon source and aeration
ORGANISM(S): Saccharomyces cerevisiae 
2007-07-07 | E-GEOD-835 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of yeast mutants Gal-YAH1, Gal-ATM1 and Gal-NBP35 to investigate responses to defects in cellular Fe-S protein maturation
The biogenesis of iron-sulfur proteins in eukaryotes is an essential process involving the mitochondrial iron-sulfur cluster (ISC) assembly and export machineries and the cytosolic Fe/S protein assembly (CIA) apparatus. To define the integration of Fe/S protein biogenesis into cellular homeostasis, ...
ORGANISM(S): Saccharomyces cerevisiae 
2007-12-14 | E-MEXP-1215 | biostudies-arrayexpress
UnknownA strategy to eradicate well-developed Krebs-2 ascites in mice.
Not available
S-EPMC4905495 | biostudies-literature
TranscriptomicsTranscriptome analysis of wild type and erythromycin-producing strain of S. erythraea
Erythromycin is a medically important antibiotic, biosynthesized by the actinomycete Saccharopolyspora erythraea. We used transcriptomic approach to compare whole genome expression in erythromycin high-producing strain, compared to the wild type S. erythraea strain in four stages of fermentation. 2 ...
ORGANISM(S): Saccharopolyspora erythraea 
2016-06-22 | E-GEOD-65007 | biostudies-arrayexpress
UnknownNew class of precision antimicrobials redefines role of <i>Clostridium difficile</i> S-layer in virulence and viability.
Not available
S-EPMC5603275 | biostudies-literature
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