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TranscriptomicsRpoE regulon in Rhodobacter sphaeroides
In Rhodobacter sphaeroides a transcriptional response to the reactive oxygen species singlet oxygen is controlled by the group IV sigma factor RpoE and the anti-sigma factor ChrR. In this study, we integrated various large datasets to identify genes within the singlet oxygen stress response that con...
ORGANISM(S): Rhodobacter sphaeroides 2.4.1 
2010-06-30 | E-GEOD-22576 | biostudies-arrayexpress
UnknownTrigger loop of RNA polymerase is a positional, not acid-base, catalyst for both transcription and proofreading.
Not available
S-EPMC5495254 | biostudies-literature
UnknownArchitecture of a transcribing-translating expressome.
Not available
S-EPMC5528865 | biostudies-literature
UnknownGenome-Scale Transcription-Translation Mapping Reveals Features of Zymomonas mobilis Transcription Units and Promoters.
Not available
S-EPMC7566282 | biostudies-literature
UnknownRNA Polymerase Clamp Movement Aids Dissociation from DNA but Is Not Required for RNA Release at Intrinsic Terminators.
Not available
S-EPMC6402830 | biostudies-literature
UnknownTrigger-helix folding pathway and SI3 mediate catalysis and hairpin-stabilized pausing by Escherichia coli RNA polymerase.
Not available
S-EPMC4227799 | biostudies-literature
ProteomicsGenome-scale transcription-translation mapping reveals features of Zymomonas mobilis transcription units and promoters
Limited functional annotation of the Z. mobilis genome is a current barrier to both basic studies of Z. mobilis and its development as a synthetic-biology chassis. To gain insight, we collected sample-matched multiomics data including RNA-seq, transcription start site sequencing (TSS-seq), terminati...
ORGANISM(S): Bacteria Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 
2020-07-10 | PXD016962 | Pride
Proteogenomics Multiomics Shotgun proteomics Zymomonas mobilis 
UnknownRNA Polymerase Accommodates a Pause RNA Hairpin by Global Conformational Rearrangements that Prolong Pausing.
Not available
S-EPMC5903582 | biostudies-literature
UnknownA pause sequence enriched at translation start sites drives transcription dynamics in vivo.
Not available
S-EPMC4108260 | biostudies-literature
UnknownA majority of Rhodobacter sphaeroides promoters lack a crucial RNA polymerase recognition feature, enabling coordinated transcription activation.
Not available
S-EPMC7703639 | biostudies-literature
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