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Unknown (29)
Transcriptomics (4)
Proteomics (2)
Genomics (1)
Metabolomics (1)

Organisms

Homo sapiens (6)
Danio rerio (1)

Repository

biostudies-arrayexpress (4)
pride (2)
EGA (1)
MetaboLights (1)

Tissue

Cerebrospinal fluid (1)
Spermatozoon (1)

Disease

Alzheimer's disease (1)

Technology Type

Mass Spectrometry (2)
Mass spectrometry (1)
Bottom-up proteomics (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)

Instrument Platform

Illumina HiSeq 2500 (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2025 (3)
2014 (2)
2020 (1)
2008 (1)

Metabolite Name

(-)-Rasfonin (1)
(10E,12Z)-octadeca-10,12-dienoic acid (1)
(1S)-(+)-(10-Camphorsulfonyl)oxaziridine (1)
(2,2-dimethyl-3,4-dihydro-2H-chromen-6-yl)acetic acid (1)
(2-Acetyloxy-3-hexadecoxypropyl) 2-(trimethylazaniumyl)ethyl phosphate (1)
(3aR,4R,5R,6aS)-5-hydroxy-4-[(3R)-3-hydroxy-5-phenylpentyl]-3,3a,4,5,6,6a-hexahydrocyclopenta[b]furan-2-one (1)
(9E)-12-hydroperoxy-5,6-dihydroxy-4-methoxy-9,13,14-trimethyl-16-(2-methylpropyl)-17-azatricyclo[9.7.0.01,15]octadeca-9,13-diene-2,18-dione (1)
(S)-(-)-N,alpha-Dimethylbenzylamine (1)
(Z)-11-hexadecenoic acid (1)
1,3-Dicyclohexylurea (1)
1,4-Dioxacycloheptadecane-5,17-dione (1)
1,5-Naphthalenediamine (1)
1,7-Bis(4-hydroxyphenyl)heptan-3-one (1)
1-(1-Ethynylcyclohexyl)piperidine (1)
1-(1Z-hexadecenyl)-sn-glycero-3-phosphocholine (1)
1-(4-Aminobenzylidene)indene (1)
1-(9Z-hexadecenoyl)-glycero-3-phosphoethanolamine (1)
1-(9Z-octadecenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) (1)
1-(9Z-octadecenoyl)-sn-glycero-3-phosphocholine (1)
1-(9Z-octadecenoyl)-sn-glycero-3-phosphoethanolamine (1)
1-(Cyclopropylsulfonyl)piperidine-4-carboxylic acid (1)
1-(Pyridin-4-yl)piperidin-4-amine (1)
1-Cyclohexyl-3-((1-(hydroxymethyl)cyclopropyl)methyl)urea (1)
1-Docosanamine (1)
1-Heptadecanoyl-glycero-3-phosphoethanolamine (1)
1-Hexadecanoyl-sn-glycero-3-phosphoethanolamine (1)
1-Methyladenosine (1)
1-Myristoyl-sn-glycero-3-phosphocholine (1)
1-O-Hexyl-2,3,5-trimethylhydroquinone (1)
1-Octadecanoyl-sn-glycero-3-phosphoethanolamine (1)

Study type

Methylation profiling by array (2)
ATAC-seq (1)
Transcription profiling by array (1)

Release Date

2024 (6)
2020 (4)
2023 (4)
2018 (4)
2022 (3)
2021 (3)
2014 (2)
2026 (2)
2019 (2)
2008 (1)
2016 (1)
2012 (1)

Lab affiliation

Fondazione Ri.MED, Proteomics lab, Palermo (1)
Professor School of Biological Sciences University of East Anglia Norwich UK (1)

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ATAC-seq in control compared to ZEB1 knock-down MDA-MB-231 cells

Identification of open chromatin regions in wildtpye, control knock-down (shCtrl) and ZEB1 knock-down (shZEB1) human breast cancer MDA-MB-231 cells by ATAC(Assay for transposable-accessible chromatin)-seq.

ORGANISM(S): Homo sapiens

2020-07-22 | E-MTAB-8264 | biostudies-arrayexpress

Comparison of popular enrichment methods for untargeted in vitro metabolomics.

Introduction

Untargeted metabolomics is a popular method by which researchers measure a large portion of the metabolites present in a biological system at once. This approach usually results in complex data sets containing tens to hundreds of thousands of observations whi...

2025-08-11 | MTBLS12332 | MetaboLights

Reorganization of Respiratory Descending Pathways following Cervical Spinal Partial Section Investigated by Transcranial Magnetic Stimulation in the Rat.

Not available

S-EPMC4734706 | biostudies-literature

Sodium arsenite induced DNA methylation changes in A549 human epithelial lung carcinoma cells

Arsenic is methylated during its metabolism, thereby depleting the intracellular methyl donor S-adenosyl-methionine, which may lead to disturbances in DNA methylation patterns Cells were exposed to sodium arsenite (NaAsO2, Sigma) at concentrations of 0.08 M-BM-5M, 0.4 M-BM-5M and 2 M-BM-5M for 1, 2 ...

ORGANISM(S): Homo sapiens

2014-09-17 | E-GEOD-44173 | biostudies-arrayexpress

The zebrafish Danio rerio sperm proteome by LC-MSMS

Fertilisation is based on the tight interaction between sperm and egg and both sperm and egg proteomes are known to evolve and diverge rapidly even between closely related species. Understanding the sperm proteome therefore provides key insights into the mechanisms involved during fertilisation and ...

ORGANISM(S): Danio rerio (Zebrafish) (Brachydanio rerio)

2025-01-27 | PXD056057 | Pride

Utility values and electronic device use in low-vision people attending rehabilitation services: Data from a nation-wide registry in Italy.

Not available

S-EPMC11315328 | biostudies-literature

Transcription profiling of human mesenchymal stem cells to determine changes over the course of cellular aging

To determine gene expression changes during in vitro senescence of MSC we have analyzed differential expression of the corresponding early passage (P2) and senescent passage (PX). There were global changes in the gene expression profile that were reproducible in three independent donor samples. Expe...

ORGANISM(S): Homo sapiens

2008-10-20 | E-GEOD-9593 | biostudies-arrayexpress

Analytical Solution to Assess the Induced Seismicity Potential of Faults in Pressurized and Depleted Reservoirs.

Not available

S-EPMC9285632 | biostudies-literature

Low mechano-energetic efficiency is associated with future left ventricular systolic dysfunction in hypertensives.

Not available

S-EPMC9288798 | biostudies-literature

Riboflavin-LSD1 axis participates in the in vivo tumor-associated macrophage morphology in human colorectal liver metastases.

Not available

S-EPMC10908638 | biostudies-literature

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