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MetabolomicsTwo apples a day modulate human:microbiome co-metabolic processing of polyphenols, tyrosine and tryptophan

PURPOSE: Validated biomarkers of food intake (BFIs) have recently been suggested as a useful tool to assess adherence to dietary guidelines or compliance in human dietary interventions. Although many new candidate biomarkers have emerged in the last decades for different foods fr...

2020-04-28 | MTBLS469 | MetaboLights
MetabolomicsGlobal ocean lipidomes show a universal relationship between temperature and lipid unsaturation

Global-scale surveys of plankton communities using “omics” techniques have revolutionized our understanding of the ocean. Lipidomics has demonstrated the potential to add further essential insights on ocean ecosystem function but has yet to be applied on a global scale. We analyzed 930 lipid samp...

2021-11-08 | MTBLS2838 | MetaboLights
MetabolomicsMetabolomics to elucidate the effects of novel sustainable feed additives in the feed of farmed salmon (HoloFood Trial A - seaweed-dose response)

Testing the effect of blue mussel ensilage as a novel cost-efficient protein feed source for Atlantic salmon feed. Fermentation of novel raw materials for fish feed is a new practice with little prior experience of direct relevance to aquaculture and fish farming. In Trial A, an alternative marin...

2023-06-13 | MTBLS4381 | MetaboLights
TranscriptomicsExpression data from primary mouse hepatocytes treated with Diclofenac
Drug-induced liver injury (DILI) is an important clinical problem. Here we used a genomics approach to establish the critical drug-induced toxicity pathways that act in synergy with the pro-inflammatory cytokine tumor necrosis factor M-oM-^AM-! (TNFM-oM-^AM-!) to cause cell death of liver HepG2 cell...
ORGANISM(S): Mus musculus 
2014-01-22 | E-GEOD-54256 | biostudies-arrayexpress
TranscriptomicsExpression analysis of an enrofloxacin and a tetracline resistant Escherichia coli strain
Comparison of the whole genome gene expression level of an enrofloxacin and tetracycline resistant E. coli strain with the wildtype it was derived from. The process of drug adaptation of E. coli MG1655 wildtype cells is further descibed in van der Horst, M, J.M. Schuurmans, M. C. Smid, B. B. Koender...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2014-04-26 | E-GEOD-57084 | biostudies-arrayexpress
UnknownDifferences between predicted outer membrane proteins of genotype 1 and 2 Mannheimia haemolytica.
Not available
S-EPMC7424683 | biostudies-literature
TranscriptomicsDevelopment of a microarray for Enchytraeus albidus (Oligochaeta): Preliminary tool with diverse applications
Standard bioassays allow hazard assessment at the population level, but much remains to be learned about the molecular level response of organisms to stressors. The main aim of this study was the development of a DNA microarray for Enchytraeus albidus, a common soil worm species. Further, this micro...
ORGANISM(S): Enchytraeus albidus 
2011-03-30 | E-GEOD-18569 | biostudies-arrayexpress
TranscriptomicsExpression analysis of an amoxicillin resistant Escherichia coli strain
Comparison of the whole genome gene expression level of an amoxicillin resistant E. coli strain with the wildtype it was derived from. The process of amoxicillin adaptation of E. coli MG1655 wildtype cells is further descibed in van der Horst, M, J.M. Schuurmans, M. C. Smid, B. B. Koenders, and B. H...
ORGANISM(S): Escherichia coli 
2013-05-27 | E-GEOD-47221 | biostudies-arrayexpress
UnknownChronic kidney disease and associated mortality after liver transplantation--a time-dependent analysis using measured glomerular filtration rate.
Not available
S-EPMC4160310 | biostudies-literature
TranscriptomicsHuman adipose tissue single-nucleus RNA-sequencing before and after lifestyle intervention
Single-nuclei RNA sequencing (snRNA-seq) data of human adipose tissue. The samples are a part of a study investigating the effect of Lifestyle intervention on human adipose tissue. The 10 participants represented in this study were severely obese at project start with a mean BMI of 46.0 ± 3.1 kg/m2 ...
ORGANISM(S): Homo sapiens 
2026-02-11 | E-MTAB-16620 | biostudies-arrayexpress
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