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ProteomicsAD-MCI-CN proteomic data (LFQ, DDA)
This data included proteomic data of 57 Alzheimer's disease patients, 43 mild cognitive patients and 62 cognitively normal controls.
ORGANISM(S): Homo Sapiens 
2023-08-18 | PXD044672 |
UnknownA High-Sensitivity Low-Nanoflow LC-MS Configuration for High-Throughput Sample-Limited Proteomics.
Not available
S-EPMC10753523 | biostudies-literature
ProteomicsA Comparison of Quantitative Mass Spectrometric Methods for Drug Target Identification by Thermal Proteome Profiling
Benchmarking different LFQ-DIA approaches with traditional TMT-DDA for thermal proteome profiling.
ORGANISM(S): Homo sapiens (Human) 
2023-10-24 | PXD040173 | Pride
Hybrid library Target deconvolution Data-dependent acquisition (dda) Tandem mass tag (tmt) Thermal proteome profiling (tpp) Acute myeloid leukaemia (aml) Spectral library Data-independent acquisition (dia) 
UnknownAbsolute and relative quantitation of amylase/trypsin-inhibitors by LC-MS/MS from wheat lines obtained by CRISPR-Cas9 and RNAi.
Not available
S-EPMC9465248 | biostudies-literature
ProteomicsDirectMS1Quant: ultrafast quantitative proteomics with MS/MS-free mass spectrometry. Part 2/2
Recently, we presented the DirectMS1 method of ultrafast proteome-wide analysis based on minute-long LC gradients and MS1-only mass spectra acquisition. Currently, the method provides the depth of human cell proteome coverage of 2500 proteins at 1% false discovery rate (FDR) when using 5-min LC grad...
ORGANISM(S): Homo sapiens (Human) 
2023-08-25 | PXD033355 | Pride
Dda lfq Tmt Glioblastoma Ms1-only 
UnknownPhospho-heavy-labeled-spiketide FAIMS stepped-CV DDA (pHASED) provides real-time phosphoproteomics data to aid in cancer drug selection.
Not available
S-EPMC9762002 | biostudies-literature
ProteomicsPhosphoproteomics of dried blood collected on Mitra devices
Venous blood was collected in Li-heparin or EDTA blood tubes and loaded onto 20 uL Mitra devices or separated to plasma as detailed in metadata. Samples were denatured in 5.5% SDC, reduced and alkylated, and digested with TPCK-trypsin followed by acid precipitation. 1 mg of filtered precipitates wer...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2023-12-10 | MSV000093624 | MassIVE
ProteomicsOTUD3-Mediated Stabilization of SLC7A11 Drives Sunitinib Resistance by Suppressing Ferroptosis in Clear Cell Renal Cell Carcinoma
After cell lysis, the global proteomes of wild-type 786O and OTUD3-knockdown (KD) 786O cell lines were analyzed using liquid chromatography-tandem mass spectrometry (LC-MS/MS). Label-free quantification (LFQ) was employed for comparative protein quantification, and tandem mass spectrometry data were...
ORGANISM(S): Homo sapiens (Human) 
2025-08-15 | PXD064004 | Pride
786o shotud3 lc/msms 
UnknownA high-resolution mass spectrometry based proteomic dataset of human regulatory T cells.
Not available
S-EPMC8671522 | biostudies-literature
ProteomicsDeep and fast label-free Dynamic Organellar Mapping - DDA data
The Dynamic Organellar Maps (DOMs) approach combines cell fractionation and shotgun-proteomics for global profiling analysis of protein subcellular localization. Here, we have drastically enhanced the performance of DOMs through data-independent acquisition (DIA) mass spectrometry (MS). DIA-DOMs ach...
ORGANISM(S): Homo sapiens (Human) 
2023-08-25 | PXD034962 | Pride
Dynamic organellar maps Dia Data quality control Data-independent acquisition mass spectrometry Spatial proteomics Profiling analysis 
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