Li Ka K - OmicsDI

Show results for

Unknown (2820)
Proteomics (61)
Transcriptomics (34)
Genomics (20)
Metabolomics (17)

Organisms

Mycobacterium tuberculosis SP7 (56)
Mycobacterium tuberculosis SP10 (56)
Mycobacterium tuberculosis SP13 (56)
Mycobacterium tuberculosis SP22 (56)
Chlamydomonas reinhardtii (56)
Enterococcus mundtii CRL35 (56)
Oncorhynchus tshawytscha (56)
Pseudomonas canadensis (56)
Pseudomonas aeruginosa PAO1H2O (56)
Human alphaherpesvirus 1 strain 17 (56)
Mycobacterium tuberculosis SP1 (56)
Marchantia polymorpha subsp. ruderalis (56)
Methylocystis sp. (56)
Exiguobacterium sp. SH31 (56)
Palaemonetes sp. common grass shrimp associated circular virus (56)
Amaranthus tricolor (56)
Spirochaeta sp. ELBA (56)
Clavibacter nebraskensis NCPPB 2581 (56)
Porites pukoensis (56)
Porphyromonas gingivalis (56)
Leishmania tarentolae (56)
Porphyromonas gingivalis W83 (56)
Human betaherpesvirus 5 (56)
Homo sapiens (30)
Mus musculus (17)
Rattus norvegicus (3)
Coffea arabica (1)
Arachis hypogaea (1)
Bombyx mori (1)
Sus scrofa (1)

Repository

pride (56)
biostudies-arrayexpress (40)
MetaboLights (17)
EGA (14)
MassIVE (5)

Tissue

Cell culture (31)
Brain (9)
T cell (4)
Blood (2)
Ovary (2)
Macrophage (2)
Breast invasive ductal carcinoma cell (1)
Ventricular cardiac muscle cell (1)
White fat cell (1)
Neuron of cerebral cortex (1)
Mammary gland epithelial cell (1)
Endothelial cell (1)
Breast cancer cell (1)
HEK-293T cell (1)
Primary cell (1)
Pluripotent stem cell (1)
Early embryonic cell (1)
Permanent cell line cell (1)
Fibroblast (1)
Skin (1)
Cell suspension culture (1)
Heart (1)
Blood plasma (1)
Kidney (1)
Embryonic stem cell (1)
Epithelial cell (1)
Leaf (1)

Disease

Alzheimer's disease (3)
Breast cancer (3)
Disease free (3)
Neurodevelopmental delay (1)
Gerstmann-Straussler-Scheinker syndrome (1)
Systolic heart failure (1)
Ovarian cancer (1)
Celiac disease (1)
Coronavirus infectious disease (1)
Rett syndrome (1)
Heart failure (1)
Brain cancer (1)

Technology Type

Mass Spectrometry (56)
Shotgun proteomics (32)
Affinity purification coupled with mass spectrometry proteomics (15)
Mass spectrometry (13)
Bottom-up proteomics (7)
Data-dependent acquisition (5)
NMR spectroscopy (4)
Affinity proteomics (3)
DiaPASEF (2)
Gel-based experiment (2)
All-ion fragmentation (1)
Data-independent acquisition (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Liquid Chromatography MS - negative - reverse phase (4)
Tandem Gas Chromatography MS - (2)
Bruker (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Nuclear Magnetic Resonance (NMR) - (2)
Liquid Chromatography MS - positive - hilic (2)
HiSeq X Ten (1)
Illumina HiSeq 2500 (1)
LTQ FT (1)
Orbitrap Ascend (1)
Orbitrap Astral (1)
Exactive Plus (1)
LTQ Orbitrap Elite (1)
Q Exactive HF-X (1)
Q Exactive (1)
Orbitrap Eclipse (1)
Liquid Chromatography MS - alternating – hilic (1)
Tandem Gas Chromatography MS - positive (1)
Flame ionisation detector MS - (1)
MS Imaging - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2021 (19)
2024 (15)
2012 (10)
2020 (9)
2025 (9)
2019 (9)
2015 (8)
2011 (6)
2023 (6)
2022 (6)
2010 (5)
2014 (4)
2018 (3)
2013 (3)
2026 (2)
2016 (1)
2009 (1)
2005 (1)
2004 (1)

CHEBI ID

CHEBI:28300 (9)
CHEBI:16811 (9)
CHEBI:18237 (8)
CHEBI:24898 (8)
CHEBI:27570 (7)
CHEBI:15891 (7)
CHEBI:18257 (7)
CHEBI:25094 (7)
CHEBI:15741 (7)
CHEBI:16449 (7)
CHEBI:16704 (7)
CHEBI:28044 (7)
CHEBI:18012 (6)
CHEBI:32816 (6)
CHEBI:17822 (6)
CHEBI:15428 (6)
CHEBI:22653 (6)
CHEBI:26271 (6)
CHEBI:29016 (6)
CHEBI:27897 (6)
CHEBI:17596 (6)
CHEBI:17126 (6)
CHEBI:16027 (6)
CHEBI:73024 (6)
CHEBI:17712 (5)
CHEBI:17754 (5)
CHEBI:22660 (5)
CHEBI:16865 (5)
CHEBI:15354 (5)
CHEBI:16919 (5)

Metabolite Name

Glutamine (6)
Methionine (6)
Isoleucine (6)
Taurine (6)
Lysine (5)
Asparagine (5)
Tryptophan (5)
Creatine (4)
Histidine (4)
Glycine (4)
Proline (4)
Choline (4)
Valine (4)
Phenylalanine (4)
Ornithine (4)
Glutamate (4)
Alanine (4)
Formate (3)
Acetate (3)
Spermidine (3)
Putrescine (3)
Fumarate (3)
D-Glucose (3)
Acetylcarnitine (3)
Thymine (3)
Succinate (3)
Carnitine (3)
Threonine (3)
Carnosine (3)
Hypoxanthine (3)

Study type

Transcription profiling by array (24)
ChIP-seq (6)
Other (3)
RNA-seq of coding RNA (3)
Unknown experiment type (1)
Differential (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (312)
2021 (312)
2023 (300)
2025 (296)
2020 (257)
2024 (246)
2018 (179)
2019 (158)
2017 (135)
2016 (130)
2015 (128)
2014 (91)
2012 (82)
2013 (75)
2011 (38)
2010 (37)
2026 (36)
2009 (23)
2008 (11)
2007 (5)
2006 (3)
2004 (2)
2000 (2)
2005 (1)
2001 (1)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (18)
Cancer Research UK Cambridge Institute University of Cambridge Li Ka Shing Centre Cambridge CB2 0RE United Kingdom (2)
Harvard Medical School (2)
St. Jude Children's Research Hospital (2)
95 Institut de Pharmacologie et de Biologie Structurale (IPBS), Université de Toulouse, CNRS, Université Toulouse III - Paul Sabatier (UT3), Toulouse, 31077, France (1)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (1)
Cancer Research UK Cambridge Institute University of Cambridge Li Ka Shing Centre Robinson Way Cambridge CB2 0RE UK (1)
Cancer Research UK- Cambridge Institute Li Ka Shing Centre Robinson way Cambridge CB2 0RE UK (1)
Cancer Research UK, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge, CB2 0RE (1)
Human Immunological Diseases Section, Laboratory of Clinical Immunology and Microbiology, Division of Intramural Research, NIAID, NIH, Department of Health and Human Services, Unites States Government (1)
Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, UK. Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge, UK. School of Clinical Medicine, University of Cambridge, Cambridge, UK. (1)
MCN, Neuroproteomics, CNCR, VU, Amsterdam (1)
Professor Institute of Botany, CAS Add: No.20 Nanxincun, Xiangshan, Beijing 100093, China Email: wangbc@ibcas.ac.cn Tel.： 86-10-62836884 (1)
Neurosurgeon & Senior Scientist Developmental and Stem Cell Biology, The Hospital for Sick Children, Canada (1)
Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong (1)
PhD (1)
Keenan Research Centre for Biomedical Science and Li Ka Shing Knowledge Institute, St. Michael's Hospital. (1)
Biochemistry and Molecular Biology, Indiana University School of Medicine (1)
The University of Texas MD Anderson Cancer Center (1)
Florey Institute (1)
The department of Molecular and cellular neurobiology, Neuroproteomics, CNCR, Vrije University Amsterdam (1)
Professor, Institute of Biomaterials & Biomedical Engineering, University of Toronto Canada Research Chair in Stem Cell Bioengineering Terrence Donnelly Centre for Cellular and Biomolecular Research Chief Scientific Officer, Centre for Commercialization of Regenerative Medicine FRSC (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF) San Francisco, CA 94158 USA (1)
University of Cambridge, Cancer Research UK Cambridge Institute, Li Ka Shing Centre, Cambridge, CB2 0RE, UK (1)
Cancer Research UK Cambridge Institute University of Cambridge Li Ka Shing Centre Cambridge CB2 0RE United Kingdom (1)
Cancer Research UK University of Cambridge Li Ka Shing Centre Robinson Way Cambridge, CB2 0RE (1)
UHN (1)
Cell Fate Engineering and Therapeutics Lab, Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR), 61 Biopolis Drive, Proteos, Singapore 138673, Republic of Singapore (1)
Cancer Research UK Cambridge Institute University of Cambridge Li Ka Shing Centre Cambridge CB2 0RE United Kingdom (1)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School Cancer Biology, Dana-Farber Cancer Institute (1)

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Plasma DNA aberrations in systemic lupus erythematosus revealed by genomic and methylomic sequencing.

Not available

S-EPMC4267379 | biostudies-literature

Platelet-Rich Plasma for Treating Chronic Noncancer Pain: A Systematic Review and Meta-analysis of Randomized Controlled Trials.

Not available

S-EPMC12279671 | biostudies-literature

Proteome wide screening for ubiquitination, ISGylation and NEDDylation sites in wildtype and ISG15 knockout mouse hearts after transverse aortic constriction

Hearts(left ventricles) were harvested from control wildtype and ISG15 knockout mice and wildtype and ISG15 knockout mice 4 weeks after pressure overload induced by transverse aortic constriction. Nano LC-MS/MS analysis was performedon left ventricle tissue following protein extraction, trypsin dige...

ORGANISM(S): Mus musculus (Mouse)

2023-05-10 | PXD032267 | Pride

Predicting the Risk of Lumbar Prolapsed Disc: A Gene Signature-Based Machine Learning Analysis.

Not available

S-EPMC12085505 | biostudies-literature

Lengthening and shortening of plasma DNA in hepatocellular carcinoma patients.

Not available

S-EPMC4372002 | biostudies-literature

Genetic susceptibility, screen-based sedentary activities and incidence of coronary heart disease.

Not available

S-EPMC9126635 | biostudies-literature

A small animal model of chronic hepatitis E infection using immunocompromised rats.

Not available

S-EPMC9424580 | biostudies-literature

Attenuation of HIV severity by slightly deleterious mutations can explain the long-term trajectory of virulence evolution.

Not available

S-EPMC12677797 | biostudies-literature

Global gene expression analysis of pluripotent cell lines and corresponding starting donor source cells

Global gene expression analysis of induced pluripotent stem cell lines and their corresponding source cells Total RNA was harvested from H9 hESC (P51), non-integrated episomal CB-iPSC clones 6.2, 6.11, 6.13, (P14), 19.11, (P11), nonviral KER-iPSC clones KA.1, KA.3 (P13) nonviral FFB-iPSC: F.1, F.6 (...

ORGANISM(S): Homo sapiens

2012-08-23 | E-GEOD-35028 | biostudies-arrayexpress

Identification of the distribution of human endogenous retroviruses K (HML-2) by PCR-based target enrichment sequencing.

Not available

S-EPMC7201656 | biostudies-literature

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2952 Results

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