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TranscriptomicsGenome-wide analysis of RNAs associated with Lin28
We used immunoprecipitation to pulldown Lin28 associated RNA targets and used genome-wide high throughput deep sequencing to identified those Lin28-associated RNAs. Keywords: Lin28 IP-RNAseq Examination of Lin28 immunoprecipitated RNA transcripts
ORGANISM(S): Homo sapiens 
2011-01-18 | E-GEOD-23109 | biostudies-arrayexpress
TranscriptomicsThe downstream gene expression of AnxA4 in AGS cells
AnxA4 expression is increased in H. pylori associated tumors. Moreover, in renal-cell cancer, AnxA4 increases tumor cell dissemination and promotes cell migration, and in colorectal cancer, it is identified as a potential diagnostic marker. How AnxA4 might be involved in tumorgenesis has remained un...
ORGANISM(S): Homo sapiens 
2012-12-20 | E-GEOD-33620 | biostudies-arrayexpress
ProteomicsBrassinosteroid-Regulated Phosphorylation Dynamics in Arabidopsis
Protein phosphorylation regulated by plant hormone is involved in the coordination of fundamental plant development. Brassinosteroids (BRs), a group of phytohormones, regulated phosphorylation dynamics remains to be delineated in plants. In this study, we performed a mass spectrometry (MS)-based pho...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2016-08-10 | PXD001473 | Pride
Arabidopsis Brassinosteroid Phosphorylation 
ProteomicsGastric cancer_iTRAQ - Integrating transcriptomics and proteomics to show that tanshinone IIA suppresses cell growth by blocking glucose metabolism in gastric cancer cells
Using quantitative proteomics-isobaric tags for relative and absolute quantification (iTRAQ), we characterize the mechanism of TIIA regulation in gastric cancer cell line AGS.
ORGANISM(S): Homo sapiens (Human) 
2016-07-08 | PXD000998 | Pride
Tanshinone iia Gastric cancer Itraq 
ProteomicsZNF322A_lung cancer_iTRAQ_LC-MSMS
ZNF322A, a transcription factor, has been identified as a novel putative oncogene in lung cancer. There are over 50% of amplification rates in both Asia and Caucasian lung cancer patients. This study is to use proteomics approach to establish the protein interaction network of ZNF322A.
ORGANISM(S): Homo sapiens (Human) 
2016-07-07 | PXD001123 | Pride
Znf322a Lung cancer Itraq 
UnknownValidation of the American Joint Commission on Cancer (8th edition) changes for patients with stage III gastric cancer: survival analysis of a large series from a Specialized Eastern Center.
Not available
S-EPMC5633559 | biostudies-literature
UnknownThe timing of continuous renal replacement therapy initiation in sepsis-associated acute kidney injury in the intensive care unit: the CRTSAKI Study (Continuous RRT Timing in Sepsis-associated AKI in ICU): study protocol for a multicentre, randomised controlled trial.
Not available
S-EPMC7896624 | biostudies-literature
GenomicsWhole Genome Sequencing of a Triple Negative Breast Cancer Patient: Matched Primary Tumor, Normal, Metastasis and Xenograft samples

Breast Cancer Subject Participant ID 700064 (Source Sample names: 6888 and 206). We used massively parallel DNA sequencing technologies to screen entire genomes, in an unbiased manner, for genetic changes associated with tumor growth and metastasis. We describe the complete genome sequence ...

phs000245.v1.p1 | EGA
ProteomicsComparisons of Whole Saliva and Cell Free Saliva by DIA-Based Proteome Profiling
Saliva has emerged as a promising diagnostic resource due to its accessibility, non-invasiveness, and repeatability, enabling early disease detection and timely intervention. However, current studies often overlook the distinction between whole saliva (WS) and cell-free saliva (CFS). This study aims...
ORGANISM(S): Homo Sapiens 
PXD055371 |
ProteomicsProteomics of prostate cancer cell lines
We profiled the proteomics of prostate cancer (PCa) cell lines.
ORGANISM(S): Homo Sapiens Mus Musculus 
2024-12-06 | PXD058635 |
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