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Unknown (109)
Transcriptomics (20)
Proteomics (9)
Genomics (4)
Metabolomics (2)

Organisms

Homo sapiens (16)
Mus musculus (12)
Pseudomonas putida (2)
Oryza sativa (1)
Bos taurus (1)

Organisms

Solanum lycopersicum (1)

Repository

biostudies-arrayexpress (22)
iProX (5)
pride (4)
MetaboLights (2)
EGA (1)
ENA (1)

Tissue

Cell culture (2)
Embryonic stem cell (1)
Epithelial cell (1)
HEK-293 cell (1)
Kidney (1)

Disease

Breast cancer (1)

Technology Type

Mass Spectrometry (4)
Affinity purification coupled with mass spectrometry proteomics (2)
Mass spectrometry (1)
Mass spectrometry assay (1)
Data-dependent acquisition (1)
Mass spectrometry imaging (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Wates I-Class/XEVO-G2 XS QTOF (1)

Publication Date

2012 (6)
2013 (4)
2016 (3)
2014 (3)
2023 (3)
2011 (2)
2010 (2)
2022 (2)
2026 (2)
2015 (1)
2009 (1)
2007 (1)
2024 (1)
2027 (1)
2019 (1)

CHEBI ID

CHEBI:100246 (1)
CHEBI:10056 (1)
CHEBI:10089 (1)
CHEBI:10097 (1)
CHEBI:10130 (1)
CHEBI:1156 (1)
CHEBI:116314 (1)
CHEBI:1235 (1)
CHEBI:1296 (1)
CHEBI:132639 (1)
CHEBI:134192 (1)
CHEBI:138815 (1)
CHEBI:138831 (1)
CHEBI:138854 (1)
CHEBI:138858 (1)
CHEBI:138863 (1)
CHEBI:138865 (1)
CHEBI:138868 (1)
CHEBI:144385 (1)
CHEBI:144388 (1)
CHEBI:144389 (1)
CHEBI:144390 (1)
CHEBI:144391 (1)
CHEBI:144392 (1)
CHEBI:144393 (1)
CHEBI:144394 (1)
CHEBI:144395 (1)
CHEBI:144396 (1)
CHEBI:144397 (1)
CHEBI:144398 (1)

Metabolite Name

(+)-(1S,2S)-Pseudoephedrine (1)
(+)-Aristolone (1)
(+)-Catechin (1)
(+)-Gallocatechin (1)
(+)-Plicamine (1)
(+)-Prosopinine (1)
(-)-Epicatechin (1)
(-)-Epigallocatechin (1)
(10S)-xylariterpenoid A (1)
(11Z,14Z)-icosadienoic acid (1)
(13Z,16Z)-docosadienoic acid (1)
(15Z)-tetracosenoic acid (1)
(1R,7S)-1,12,13-trihydroxybisabola-3,10-diene (1)
(1S,2R)-4-(hydroxymethyl)-3,5,5-trimethylcyclohex-3-ene-1,2-diol (1)
(1S,2S,4S,5'R,7S,8R,12S,13S,16S,18S)-16-hydroxy-5',7,13-trimethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one (1)
(1S,3R,3a1S,8R,10S,11aS)-1,5,10-trihydroxy-3,3a1,8,11a-tetramethyl-2,11-dioxohexadecahydrodibenzo[de,g]chromen-4-yl acetate* (1)
(2-Oxo-5-methoxyindoline-1-yl)carbamic acid methyl ester (1)
(2-aminoethoxy)({3-hydroxy-2-[(9E)-octadec-9-enoyloxy]propoxy})phosphinic acid (1)
(2-aminoethoxy)[2-hydroxy-3-(octadeca-9,12,15-trienoyloxy)propoxy]phosphinic acid* (1)
(2-{[(2S)-2,3-dihydroxypropyl phosphonato]oxy}ethyl)trimethylazanium (1)
(23S)-11Beta,23-Dihydroxy-8Alpha,9Beta,14Beta-Dammar-13(17)-Ene-3,24-dione (1)
(2E,4E)-3,8,8,8-tetrachloro-7-(4-chlorophenyl)-2-hydroxy-6-oxo-octa-2,4-dienoate (1)
(2E,4E)-9-hydroxy-N-(2-methylpropyl)nona-2,4-dienamide (1)
(2E,4S,5R)-5-hydroxy-4-methylhept-2-enoic acid (1)
(2R)-2-azaniumyl-3-(4-chlorophenyl)propanoate (1)
(2R,3R)-2-(3,4-dihydroxyphenyl)-5,7-dihydroxychroman-3-yl 2,4,6-trihydroxybenzoate (1)
(2R,3R,4S)-2-(6-aminopurin-9-yl)-4-(hydroxymethyl)oxolan-3-ol* (1)
(2R,5S)-2,5-Diaminohexanoate (1)
(2R,6R)-piperidine-2,6-dicarboxylic acid (1)
(2S)-2-hydroxytetradecanoic acid (1)

First Public Date

2023 (1)

Study type

Transcription profiling by array (7)
RNA-seq of coding RNA (7)
ChIP-chip by tiling array (2)
Methylation profiling by array (2)
Unknown experiment type (1)
ChIP-seq (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2018 (31)
2021 (14)
2025 (13)
2024 (11)
2023 (9)
2014 (7)
2022 (7)
2015 (6)
2012 (6)
2013 (5)
2019 (5)
2011 (3)
2020 (3)
2016 (2)
2010 (2)
2009 (2)
2017 (2)
2007 (1)
2026 (1)
2008 (1)

Lab affiliation

Department of Plant Biology, Carnegie Institution for Science, Stanford, California, USA (1)
Jiangsu Academy of Agricultural Sciences,Institute of Veterinary Medicine,#50 Zhong Ling Street, Nanjing, Jiangsu Province 210014, P. R.China (1)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 (1)
Sun Yat-Sen University (1)

Tags

xref:PubMed:37332726 (1)

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Co-Immunoprecipitation of TMEM65

Mitochondrial Ca2+ transport is a critical process in cellular physiology. One pathway for export occurs via Na+/Ca2+exchange (mito-NCX) machinery. TMEM65 has recently been shown to be crucial for mito-NCX activity, but its precise mechanistic role remains unknown. To evaluate whether TMEM65 forms a...

ORGANISM(S): Homo sapiens (Human)

2026-02-09 | PXD064897 | Pride

Co-ip Lc-ms/ms

shld1 effect on 3T3 cell

NIH3T3 cells were cultured in medium containing 1 uM, 100 nM, 10 nM and 0 nM (serve as control) shld1 for 24 hours. Three independent cultures were obtained for each drug concentration. Total RNA from experimental samples were extracted using RNeasy Kit (Qiagen). Mouse RNA pooled from 11 cell line...

ORGANISM(S): Mus musculus

2007-09-27 | E-GEOD-5916 | biostudies-arrayexpress

Treatment patterns and outcomes of older patients with mantle cell lymphoma in an Asian population.

Not available

S-EPMC8130422 | biostudies-literature

Metabolic Remodeling of Soil Ecosystems by the medicinal fungus Wolfiporia cocos: Bidirectional Feedback and Functional Consequences

Widely targeted metabolomics based on UPLC-MS/MS was performed to explore metabolic differences between two tissues of Wolfiporia cocos sclerotium. Samples include inner white tissue (Fuling Bai) and outer layer (Fuling Pi) of sclerotium, with 3 biological replicates for each group. A total of 1565 ...

2027-08-10 | MTBLS15360 | MetaboLights

Identification of a microRNA regulator for axon guidance in the olfactory bulb of adult mice

Using the highly sensitive miRNA array, we screened 40 microRNAs abundant in the olfactory bulb and we explored the functions of these miRNAs in the olfactory bulb by Gene Ontology and Kyoto Encyclopedia of Genes annotation. The enrichment results indicated that these miRNAs mainly participated in t...

ORGANISM(S): Mus musculus

2014-08-27 | E-GEOD-55463 | biostudies-arrayexpress

Plasma Phospholipid Polyunsaturated Fatty Acid Associations with Neurocognition.

Not available

S-EPMC10650577 | biostudies-literature

N-terminal pro-B-type natriuretic peptide and prognosis in Caucasian vs. Asian patients with heart failure.

Not available

S-EPMC5880675 | biostudies-literature

Distribution of EBP50 binding motifs.

The aim of this study is to identify EBP50 binding sequence. Chip-on-chip experiment with chromatin immunoprecipated with anti-EBP50 antibody is labeled with Cy5 and mock IP (Input DNA) is labeled with Cy3.

ORGANISM(S): Homo sapiens

2012-11-16 | E-GEOD-33775 | biostudies-arrayexpress

Palaeoenvironments and hominin evolutionary dynamics in southeast Asia.

Not available

S-EPMC10533506 | biostudies-literature

An evaluation of Z-transform algorithms for identifying subject-specific abnormalities in neuroimaging data.

Not available

S-EPMC5607089 | biostudies-literature

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144 Results

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