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TranscriptomicsIntegrating chromosomal aberrations and gene expression profiles to dissect rectal cancer
Accurate staging of rectal tumors is essential for making the correct treatment choice. In a previous study, we found that loss of 17p, 18q and gain of 8q, 13q and 20q could distinguish adenoma from carcinoma tissue and that loss of 1q was related to lymph node metastasis. In order to find markers f...
ORGANISM(S): Homo sapiens 
2008-10-21 | E-GEOD-12225 | biostudies-arrayexpress
TranscriptomicsHigh Resolution Copy Number Analysis of Paraffin Embedded Archival Tissue Using SNP BeadArrays
High density SNP microarrays provide insight into the genomic events that occur in diseases like cancer by their capability to measure both LOH and genomic copy numbers. Where currently available methods are restricted to the use of fresh frozen tissue, we now describe the design and validation of c...
ORGANISM(S): Homo sapiens 
2006-09-01 | E-GEOD-5347 | biostudies-arrayexpress
ProteomicsProteomic profiling of breast cancer-derived extracellular vesicles
In-depth (phospho)proteome characterization of breast cancer derived extracellular vesicles (EVs).
ORGANISM(S): Homo sapiens (Human) 
2019-10-24 | PXD012162 | Pride
Breast cancer Extracellular vesicles 
UnknownPROACTING: predicting pathological complete response to neoadjuvant chemotherapy in breast cancer from routine diagnostic histopathology biopsies with deep learning.
Not available
S-EPMC10644597 | biostudies-literature
UnknownA morphometric signature to identify ductal carcinoma in situ with a low risk of progression.
Not available
S-EPMC11775207 | biostudies-literature
UnknownIdentification of BRCA1-like triple-negative breast cancers by quantitative multiplex-ligation-dependent probe amplification (MLPA) analysis of BRCA1-associated chromosomal regions: a validation study.
Not available
S-EPMC5070367 | biostudies-literature
UnknownThe colorectal cancer risk at 18q21 is caused by a novel variant altering SMAD7 expression.
Not available
S-EPMC2694486 | biostudies-literature
UnknownComprehensive analysis of the systemic immune landscape across breast cancer subtypes and disease stages.
Not available
S-EPMC12415084 | biostudies-literature
UnknownFunctional RECAP (REpair CAPacity) assay identifies homologous recombination deficiency undetected by DNA-based BRCAness tests.
Not available
S-EPMC9232391 | biostudies-literature
UnknownRobust BRCA1-like classification of copy number profiles of samples repeated across different datasets and platforms.
Not available
S-EPMC5528812 | biostudies-literature
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