Liu Bo B - OmicsDI

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Unknown (368)
Proteomics (108)
Metabolomics (31)
Transcriptomics (30)
Genomics (12)
Multiomics (6)
Other (1)

Organisms

Homo sapiens (70)
Mycobacterium tuberculosis SP7 (26)
Mycobacterium tuberculosis SP10 (26)
Mycobacterium tuberculosis SP13 (26)
Mycobacterium tuberculosis SP22 (26)
Mus musculus (15)
Bemisia tabaci (3)
Macaca mulatta (2)
Oryza sativa (2)
Rattus norvegicus (2)
Triticum carthlicum (1)
Citrullus lanatus (1)
Streptococcus mutans UA159 (1)
uncultured bacterium (1)
Pan troglodytes (1)
Brassica rapa (1)
Nicotiana benthamiana (1)
Nicotiana tabacum (1)
Geobacter sulfurreducens (1)
Sus scrofa (1)
Rosa roxburghii (1)
Edwardsiella tarda (1)
Camellia sinensis var. assamica (1)
Macrobrachium rosenbergii (1)
Macaca fascicularis fascicularis (1)
Zea mays (1)
Drosophila melanogaster (1)
Elaphurus davidianus (1)
Rattus rattus (1)
Escherichia coli (1)

Repository

iProX (56)
biostudies-arrayexpress (31)
MetaboLights (28)
pride (26)
PeptideAtlas (16)
EGA (11)
MassIVE (10)
GNPS (3)
GPMDB (1)

Tissue

Plasma Non-glyco (11)
Cell culture (10)
Others (3)
Testis (3)
Male Reproductive System (2)
Fungal cell (2)
Microglial cell (1)
Pancreas (1)
Kidney cell (1)
Embryonic stem cell (1)
Plant cell (1)
Brain (1)
Cell suspension culture (1)
Blood plasma (1)
Whole body (1)
Leaf (1)
Fibroblast (1)
Hepatocyte (1)
Permanent cell line cell (1)

Disease

Disease free (2)
Normal (1)
Not Available (1)
Duodenal ulcer (1)
Fungal infectious disease (1)

Technology Type

Mass Spectrometry (26)
Mass spectrometry (25)
Shotgun proteomics (15)
Data-dependent acquisition (4)
Bottom-up proteomics (4)
Mass spectrometry assay (2)
Data-independent acquisition (2)
NMR spectroscopy (1)
Gel-based experiment (1)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

LTQ Orbitrap Velos (14)
Liquid Chromatography MS - positive - reverse phase (14)
Liquid Chromatography MS - negative - reverse phase (9)
MS:1000031 (3)
Liquid Chromatography MS - negative - hilic (3)
Illumina HiSeq 2000 (2)
TripleTOF 6600 (2)
Q Exactive HF (2)
Orbitrap Fusion Lumos (2)
Gas Chromatography MS - (2)
6540 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - positive - hilic (2)
LTQ Orbitrap Elite (2)
NextSeq 500 (1)
LTQ FT (1)
MaXis (1)
Instrument (1)
Q Exactive (1)
LTQ Orbitrap (1)
Xevo G2-XS QTOF (Waters) (1)
Gas Chromatography MS - positive (1)
Bruker (1)
Xevo G2 QTOF (Waters) (1)
Xevo QTof MS (Waters) (1)
Liquid Chromatography MS - positive (1)
QExactive (1)

Publication Date

2015 (18)
2022 (17)
2023 (15)
2020 (13)
2025 (12)
2014 (9)
2026 (9)
2013 (8)
2024 (8)
2021 (7)
2016 (7)
2011 (5)
2012 (4)
2019 (4)
2017 (3)
2010 (2)
2018 (2)
2009 (1)
2008 (1)
2007 (1)
2004 (1)

UNIPROT ID/AC

Q9C075 (16)
Q99456 (16)
Q92764 (16)
Q8N1N4 (16)
Q86Y46 (16)
Q7RTS7 (16)
Q6KB66 (16)
Q15323 (16)
Q14532 (16)
Q14525 (16)
Q3SY84 (16)
Q14CN4 (16)
Q04695 (16)
Q01546 (16)
O75694 (16)
O14556 (16)
P35222 (16)
Q7Z3Z0 (16)
Q7Z3Y7 (16)
Q5XKE5 (16)
Q14974 (16)
P84077 (16)
P62241 (16)
P61204 (16)
P52209 (16)
Q9P1U1 (16)
Q9NSB2 (16)
Q9H4B7 (16)
Q9H0C2 (16)
Q9BYX7 (16)

ENSEMBL ID

ENSG00000170477 (16)
ENSG00000147251 (8)
ENSG00000247315 (5)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16359 (10)
CHEBI:16750 (9)
CHEBI:17509 (9)
CHEBI:15756 (9)
CHEBI:17351 (9)
CHEBI:16708 (8)
CHEBI:15741 (8)
CHEBI:16335 (8)
CHEBI:17568 (8)
CHEBI:7916 (8)
CHEBI:16704 (8)
CHEBI:17596 (8)
CHEBI:17368 (8)
CHEBI:30769 (8)
CHEBI:17822 (7)
CHEBI:17015 (7)
CHEBI:17821 (7)
CHEBI:55328 (7)
CHEBI:48131 (7)
CHEBI:28716 (7)
CHEBI:27432 (7)
CHEBI:30805 (6)
CHEBI:18257 (6)
CHEBI:25017 (6)
CHEBI:15428 (6)
CHEBI:16610 (6)
CHEBI:28044 (6)
CHEBI:28790 (6)
CHEBI:37024 (6)
CHEBI:16196 (6)

Metabolite Name

Guanosine (8)
Hypoxanthine (8)
Uracil (7)
Cholic acid (7)
Adenosine (7)
Adenine (7)
Inosine (7)
Palmitic acid (6)
Linoleic acid (6)
L-Histidine (5)
Riboflavin (5)
Dodecanoic acid (5)
Xanthine (5)
Leucine (4)
Glycine (4)
Genistein (4)
Glucosamine (4)
Thymine (4)
9-OxoODE (4)
5'-Methylthioadenosine (4)
Phytosphingosine (4)
Nicotinamide (4)
Taurine (4)
Xanthosine (4)
Elaidic acid (4)
Citric acid (4)
Serine (4)
Guanine (4)
Oleic acid (4)
Glutamine (4)

Modification

15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (18)
RNA-seq of coding RNA (7)
RNA-seq of non coding RNA (2)
ChIP-chip by tiling array (1)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
RNA-seq of total RNA (1)

Release Date

2025 (49)
2022 (48)
2021 (44)
2024 (33)
2023 (28)
2020 (28)
2018 (21)
2016 (21)
2013 (20)
2017 (20)
2015 (18)
2014 (14)
2019 (14)
2012 (13)
2011 (13)
2026 (6)
2010 (3)
2009 (2)
2008 (1)
2007 (1)
2004 (1)
2005 (1)

Lab affiliation

CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China (2)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School, Nanjing Medical University, Suzhou 215002, China. (2)
Zhongshan School of Medicine Sun Yat-sen University, Guangzhou, China (1)
State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China (1)
Department of Oncology,Mayo clinic, USA (1)
State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China. (1)
National Engineering Research Center of Rice and Byproduct Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, Hunan 410004, China. (1)
The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital,Suzhou 215002, China (1)
State Key Laboratory of Experimental Hematology, National Clinical Research Center for Blood Diseases, Institute of Hematology & Blood Diseases Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College (1)
Kunming Institute of Zoology, Chinese Academy of Sciences (1)
Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Science, Xujiaping No.1, Lanzhou, Gansu, 730046 (1)
Department of Immunology & National Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (CAMS) & Peking Union Medical College, Beijing (1)
BGI-Shenzhen (1)
Institute of Basic Medical Sciences, Xiyuan hospital China Academy of Chinese Medical Sciences (1)
Department of Chemistry, University of Missouri-Columbia (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School, Nanjing Medical University, Suzhou 215002, China (1)
Department of System Biology, School of Life Sciences, Guangdong Provincial Key Laboratory of Cell Microenvironment and Disease Research, Shenzhen Key Laboratory of Cell Microenvironment, Southern University of Science and Technology, Shenzhen, 518055, China. (1)
Key Laboratory of Crop Ecophysiology and Farming Systems in the Middle Reaches of the Yangtze River, Ministry of Agriculture, P.R. China; College of Plant Science and Technology, Huazhong Agricultural University, 430070, Wuhan, Hubei, China (1)
The First Affiliated Hospital, School of Medicine, Zhejiang University (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School of Nanjing Medical University, Suzhou 215002, China (1)
SMPH/SURGERY/VASCULAR SURGERY (1)
Jiangxi Province Key Laboratory of Laboratory Medicine, Department of Clinical Laboratory, The Second Affiliated Hospital of Nanchang University, Nanchang, China. (1)
BGI-shenzhen (1)
Proteomics (1)

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Autoantibodies in Chinese patients with chronic hepatitis B: prevalence and clinical associations.

Not available

S-EPMC4284347 | biostudies-literature

Expression profile of trace metal element responsive genes in Brassica rapa

Purpose: Zinc deficiency (ZnD) and iron deficiency (FeD), excess Zn (ZnE) and cadmium exposure (CdE) are major environmental problems for crop cultivation. Methods: Applying Tag-Seq technology to leaves of Brassica rapa grown under FeD, ZnD, ZnE or CdE conditions, with normal conditions as a control...

ORGANISM(S): Brassica rapa

2014-09-30 | E-GEOD-55264 | biostudies-arrayexpress

Exploration of hanging coffin customs and the bo people in China through comparative genomics.

Not available

S-EPMC12634697 | biostudies-literature

CN-CHPP 2015 Testis Project - Tissue-Based Proteogenomics Reveals that Human Testis Endows Plentiful Missing Proteins

The testis tissue-based trans-omics was a feasible approach to find more missing proteins (MPs) because it was reported higher gene expression found in testis tissues. Three testis tissues and two protein separation strategies were selected to quantitatively evaluate gene expression abundance at the...

ORGANISM(S): Homo sapiens (Human)

2015-11-03 | PXD002179 | Pride

Preactivation of the interferon signaling in liver is correlated with non-response to interferon alpha therapy in patients chronically infected with hepatitis B virus

To screen the differentially expressed genes between responders(Rs) and nonresponders(NRs) in CHB patients treated with IFN-α, and to explore the molecular basis for treatment failure.Expression profiling was performed on percutaneous needle liver biopsy specimens taken before therapy.Gene expressio...

ORGANISM(S): Homo sapiens

2011-03-01 | E-GEOD-27555 | biostudies-arrayexpress

Spiradiclis pengshuiensis (Ophiorrhizeae, Rubioideae), a new species from Chongqing, China.

Not available

S-EPMC4956927 | biostudies-literature

Untargeted plasma metabolome identifies biomarkers in patients with extracranial arteriovenous malformations

OBJECTIVE: This study aimed to investigate the plasma metabolic profile of patients with extracranial arteriovenous malformations (AVM).

METHOD: Plasma samples were collected from 32 AVM patients and 30 healthy controls (HC). Ultra-high performance liquid c...

2023-10-30 | MTBLS7753 | MetaboLights

Predictive effects of bilirubin on response of colorectal cancer to irinotecan-based chemotherapy.

Not available

S-EPMC4837442 | biostudies-literature

Add-On therapy with Chinese herb medicine Bo-Er-Ning capsule (BENC) improves outcomes of gastric cancer patients: a randomized clinical trial followed with bioinformatics-assisted mechanism study.

Not available

S-EPMC6048393 | biostudies-literature

Global Analysis of the Transcriptional Response of Whitefly to Tomato Yellow Leaf Curl China Virus (TYLCCNV)

We investigated the transcriptional response of invasive B. tabaci B biotype to tomato yellow leaf curl China virus (TYLCCNV) using Illumina sequencing technology. We found that 1,606 genes involved in 157 biochemical pathways were differentially expressed in the viruliferous whiteflies. Culture of ...

ORGANISM(S): Bemisia tabaci

2011-03-22 | E-GEOD-24374 | biostudies-arrayexpress

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