Liu Ning N - OmicsDI

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Unknown (455)
Proteomics (80)
Transcriptomics (21)
Metabolomics (10)
Genomics (7)
Multiomics (3)

Organisms

Homo sapiens (44)
Andropogon gerardi (31)
Bacteria (31)
Canis lupus familiaris (31)
Cnidaria (31)
Cricetulus griseus (31)
Eukaryota (31)
Fasciola (31)
Hepatitis B virus (31)
Human betaherpesvirus 5 (31)
Madurella mycetomatis (31)
Mesocricetus auratus (31)
Mus musculus (10)
Gallus gallus (3)
Rattus norvegicus (3)
Arabidopsis thaliana (2)
Macaca fascicularis fascicularis (2)
Sus scrofa domesticus (2)
Salix suchowensis (1)
Zea mays (1)
Oryza sativa (1)
Chimonanthus praecox (1)
Haemaphysalis longicornis (1)
Pyricularia oryzae P131 (1)
Rattus rattus (1)
Riemerella anatipestifer RA-YM (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Solanum tuberosum (1)
Triticum aestivum (1)
Escherichia coli (1)

Repository

iProX (42)
pride (31)
biostudies-arrayexpress (21)
MetaboLights (10)
EGA (7)
MassIVE (3)
PeptideAtlas (3)
PanoramaPublic (1)

Tissue

Plant cell (5)
Liver (4)
Others (3)
Cell culture (3)
Leaf (3)
Byssus (2)
Colon (2)
Rosette (2)
Whole body (2)
Brain (1)
Epithelial cell (1)
Fibroblast (1)
Gut (1)
Heart (1)
Malignant cell (1)
Primary cell (1)
Skin (1)
Uterine endometrial cancer cell (1)

Disease

Colon cancer (1)
Disease free (1)
Endometrial Endometrioid Adenocarcinoma (1)
Neuroblastoma (1)

Technology Type

Mass Spectrometry (31)
Shotgun proteomics (20)
Mass spectrometry (8)
Bottom-up proteomics (6)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Data-dependent acquisition (3)
Mass spectrometry assay (2)
Data-independent acquisition (2)
Top-down proteomics (2)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - positive - reverse phase (5)
LTQ Orbitrap Elite (3)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
TBS380 (1)
Nanodrop2000 (1)
NA (1)
Illumina NovaSeq 6000 (1)
LTQ Orbitrap Discovery (1)
Orbitrap Astral (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
QExactive (1)

Publication Date

2023 (11)
2025 (9)
2024 (9)
2021 (9)
2022 (8)
2014 (7)
2020 (7)
2015 (5)
2013 (5)
2018 (4)
2016 (3)
2012 (3)
2019 (3)
2010 (2)
2026 (2)
2009 (1)
2008 (1)
2006 (1)
2017 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
A0JLT2 (3)
A0JNW5 (3)
A0MZ66 (3)
A0PJW6 (3)
A0PK00 (3)
A1A4S6 (3)
A1L0T0 (3)
A1L170 (3)
A1L390 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:17203 (6)
CHEBI:16704 (6)
CHEBI:16414 (6)
CHEBI:17895 (6)
CHEBI:17368 (6)
CHEBI:16755 (5)
CHEBI:18132 (5)
CHEBI:16235 (5)
CHEBI:16335 (5)
CHEBI:18019 (5)
CHEBI:18050 (5)
CHEBI:16359 (5)
CHEBI:17405 (5)
CHEBI:15971 (5)
CHEBI:15318 (5)
CHEBI:16857 (5)
CHEBI:17053 (5)
CHEBI:32816 (5)
CHEBI:16027 (5)
CHEBI:16737 (5)
CHEBI:17191 (5)
CHEBI:16643 (5)
CHEBI:17295 (5)
CHEBI:16828 (5)
CHEBI:18344 (5)
CHEBI:17687 (5)
CHEBI:22470 (4)
CHEBI:16856 (4)
CHEBI:16797 (4)
CHEBI:16525 (4)

Metabolite Name

Adenosine (3)
Guanine (3)
Dihydrouracil (3)
L-Tyrosine (3)
7-ketolithocholic acid (2)
Phe-Glu (2)
1-Naphthylamine (2)
L-Tyrosine methyl ester (2)
L-Saccharopine (2)
UDP-glucose (2)
8(S)-HETrE (2)
N6,N6,N6-Trimethyl-L-lysine (2)
1-Methylnicotinamide (2)
N1-Methyl-2-pyridone-5-carboxamide (2)
3-(2-Hydroxyphenyl)propanoic acid (2)
AMP (2)
Chenodeoxycholic Acid (2)
Thymine (2)
N6-Acetyl-L-lysine (2)
L-Lysine (2)
Argininosuccinic acid (2)
1-Aminocyclopropanecarboxylic acid (2)
L-Proline (2)
4-Pyridoxic acid (2)
Kynurenic acid (2)
L-Threonine (2)
Biliverdin (2)
Deoxycholic acid (2)
Cholic acid (2)
Dethiobiotin (2)

Modification

4x(2)H labeled dimethylated L-lysine (3)

Study type

Transcription profiling by array (12)
RNA-seq of coding RNA (5)
Comparative genomic hybridization by array (2)
Genotyping by array (1)
Transcription profiling by RT-PCR (1)

Release Date

2024 (70)
2025 (61)
2023 (58)
2022 (54)
2021 (45)
2020 (41)
2019 (25)
2018 (19)
2017 (18)
2016 (15)
2015 (15)
2013 (14)
2014 (11)
2012 (8)
2026 (6)
2010 (5)
2008 (3)
2006 (3)
2011 (3)
2009 (2)

Lab affiliation

Division of Life Science, The Hong Kong University of Science and Technology (2)
Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong SAR, China (2)
Faculty of Medicine, University of Ottawa (2)
Hong Kong University of Science and Technology (2)
Radboud Institute of Molecular Life Sciences (2)
1 Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China. 2 Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. 3 Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Agronomy College, Henan Agricultural University, China (1)
Animal Clinical Pathology, College of Animal Science and Veterinary Medicine, Shandong Agricultural University,Shandong Province, China (1)
Assistant Professor, Biochemistry And Molecular Biology, School of Medicine, Tulane University (1)
Chair of Microbial Bioenergetics and Bioengineering Institute of Integrative Biology, University of Liverpool,Crown Street, Liverpool L69 7ZB, United Kingdom (1)
College of Biology, Hunan University (1)
College of Marine Life Sciences, Ocean University of China, Qingdao, China (1)
Department of Endocrine and Metabolic Diseases, Shanghai Institute of Endocrine and Metabolic Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China. (1)
Department of General Surgery, Key Laboratory of Hepatosplenic Surgery, Ministry of Education, The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Department of Gynecological Oncology, Tongji Hospital, Tongji Medical College,Huazhong University of Science and Technology (1)
Department of Molecular Biology, Radboud Institute for Molecular Life Sciences (1)
Department of Pediatrics, Shengjing Hospital of China Medical University (1)
Dermatology and Venereology Division, Department of Medicine (Solna), Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden (1)
Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Crown Street, Liverpool L69 7ZB United Kingdom MOE Key Laboratory of Evolution and Marine Biodiversity, Frontiers Science Center for 10 Deep Ocean Multispheres and Earth System & College of Marine Life Sciences, Ocean University of China, Qingdao 266003, China. (1)
LIFE Science, HKUST (1)
National Key Discipline Laboratory, Department of Nutrition and Food Hygiene, School of Public Health, Harbin Medical University, Harbin, P. R. China (1)
Ocean University of China (1)
School of Life Sciences, The Chinese University of Hong Kong, Hong Kong, China (1)
State Key Laboratory of Developmental Biology of Freshwater Fish, College of Life Science, Hunan Normal University, Changsha, 410081, P. R. China. (1)
State Key Laboratory of Marine Environmental Science/College of the Environment and Ecology, Xiamen University, Xiamen, 361005, China (1)
The Hong Kong University of Science and Technology (1)

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The active ingredients of Jiang-Zhi-Ning: study of the Nelumbo nucifera alkaloids and their main bioactive metabolites.

Not available

S-EPMC6268456 | biostudies-literature

Origin and evolution of emerging Liao ning Virus (genus Seadornavirus, family Reoviridae).

Not available

S-EPMC7359424 | biostudies-literature

Fibrinogen to HDL-Cholesterol ratio as a predictor of mortality risk in patients with acute myocardial infarction.

Not available

S-EPMC10962130 | biostudies-literature

Controlling HIV epidemics among injection drug users: eight years of Cross-Border HIV prevention interventions in Vietnam and China.

Not available

S-EPMC3428343 | biostudies-literature

(E)-N'-(5-Chloro-2-hydroxy-benzyl-idene)-3,5-dihydroxy-benzohydrazide mono-hydrate.

Not available

S-EPMC2968927 | biostudies-literature

Quantitative proteomic analysis of breast cancer tissues

We compared label-free and SILAC based quantative methods in combination with shotgun, directed and targeted MS methods in laser capture microdissected breast cancer tissues (biological replicates) as well as whole tissue lysates (technical replicates). We aim to recommend a quantitative method for ...

ORGANISM(S): Homo sapiens (Human)

2013-08-23 | PXD000278 | Pride

Human triple negative breast cancer tissues

Tissue samples were cut into 8-µm frozen sections and then microdissected to obtain ~4,000 breast cancer epithelial cells using a P.A.L.M. MicroBeam system (Carl Zeiss MicroImaging, GmbH, Munich, Germany). Proteins were extracted from microdissected cells, followed by denaturation, reduction and alk...

ORGANISM(S): Homo sapiens (Human)

2014-01-13 | PXD000260 | Pride

Human Label-free proteomics Laser capture microdissection Triple negative breast cancer Prognosis Lc-ms/ms

Affymetrix SNP6.0 array data for different clinical outcomes of HBV infection

Chronic hepatitis B virus (HBV) infection is a serious global public health problem. To identify susceptibility loci for disease progression of HBV infection, we performed this genome-wide association study using DNA pools of case and control constructed by progressed HBV carriers (acute liver failu...

ORGANISM(S): Homo sapiens

2013-12-10 | E-GEOD-26034 | biostudies-arrayexpress

Transcriptomics and metabolomics of engineered Synechococcus elongatus during photomixotrophic growth

BACKGROUND: Converting carbon dioxide (CO2) into value-added chemicals using engineered cyanobacteria is a promising strategy to tackle the global warming and energy shortage issues. However, most cyanobacteria are autotrophic and use CO2 as a sole carbon source, which makes it h...

2022-03-21 | MTBLS2825 | MetaboLights

A degressive quantum convolutional neural network for quantum state classification and code recognition.

Not available

S-EPMC10951634 | biostudies-literature

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573 Results

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