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ProteomicsB. abortus 104M LC-MS/MS - A comprehensive proteogenomic study of the human Brucella vaccine strain 104 M
In the present study, we performed subcellular fractionation prior to protein extraction to reduce interference. Whole cell protein and membrane protein extracts were prepared for strain 104M. Peptide fractionation prior to analysis is an alternative method that achieves higher proteome coverage. Co...
ORGANISM(S): Brucella abortus 104M 
2017-05-29 | PXD005403 | Pride
B. abortus 104m Lc-ms/ms 
ProteomicsChinese yew seed dormancy and germination
This project try to provide Chinese yew dormant and germinating seed proteome
ORGANISM(S): Taxus Mairei 
PXD042641 |
TranscriptomicsTranscriptional profiles of PA1 teratoma cells transfected by RIPK1, RIPK2, RIPK3, or RIPK4
RIPK4 but not the related kinases RIPK1, RIPK2, and RIPK3 caused similar transcriptional changes to Wnt3a. PA1 cells were transfected by 8ug RIPK1, RIPK2, RIPK3, or RIPK4 for 48h, RNA were extracted and sequenced.
ORGANISM(S): Homo sapiens 
2013-02-04 | E-GEOD-43362 | biostudies-arrayexpress
UnknownFGF4 initiates X-chromosome inactivation via activating YY1 and prompting loss of pluripotency factors
Not available
S-SCDT-10_1038-S44318-026-00722-2 | biostudies-other
UnknownThe First Isolation of Multiple Antifungal-Drug-Resistant Trichophyton Rubrum in China and the Novel Resistance Mechanism.
Not available
S-EPMC12624381 | biostudies-literature
Proteomicsproteomics analysis of small extracellular vesicles from mouse liver tissue across age groups
The project aims to investigate the proteomic changes in small extracellular vesicles (sEVs) derived from mouse liver tissue across different age groups to identify proteins associated with aging. The study employs a comprehensive proteomic analysis to reveal age-dependent alterations in protein exp...
ORGANISM(S): Mus musculus (Mouse) 
2025-01-09 | PXD059350 | Pride
Mouse liver sevs lc-ms/ms aging 
MetabolomicsDietary Differences Mediate Gut Microbiota Remodeling, Metabolite Alterations, and Host-Microbial Interactions in Mandarin Fish (Siniperca chuatsi)

Dietary regimen exerts a dominant influence in reshaping the gut microbiota structure and microbial metabolite types and levels in S. chuatsi, subsequently affecting host physiological functions like immunity, and has a more pronounced effect than environmen...

2026-02-18 | MTBLS13914 | MetaboLights
ProteomicsPinctada fucata martensii shell matrix protein LC-MSMS
Nacre, the iridescent material found in pearls and shells of molluscs, is formed through an extraordinary process of matrix-assisted biomineralization. Despite recent advances, many parts of the biomineralization process and its evolutionary origin remain a mystery. The pearl oyster Pinctada fucata ...
ORGANISM(S): Bivalvia 
2017-07-07 | PXD006786 | Pride
Lc-msms Shell matrix protein Pearl oyster 
UnknownA positive feedback loop between TAZ and miR-942-3p modulates proliferation, angiogenesis, epithelial-mesenchymal transition process, glycometabolism and ROS homeostasis in human bladder cancer.
Not available
S-EPMC7836562 | biostudies-literature
ProteomicsSuccinyl-proteome profiling reveals HDAC8-mediated CAPZB desuccinylation regulates cytoskeleton remodeling in bleomycin-induced idiopathic pulmonary fibrosis
Idiopathic pulmonary fibrosis (IPF) is a chronic progressive lung disease of unknown etiology, characterized by progressive scarring and fibrosis of the lungs, leading to irreversible loss of lung function. Current mechanism studies have found that fibroblasts, as the main effector cells, exhibit ab...
ORGANISM(S): Mus musculus (Mouse) 
2026-04-30 | PXD075455 | Pride
Idiopathic pulmonary fibrosis  lysine succinylation  succinyl-proteome  capzb  hdac8  cytoskeleton remodeling  lc-ms/ms  mouse lung tissue 
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