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ProteomicsProteomics analysis in HL-1 cells
DUBs are essential for maintaining protein stability and functionality, playing significant roles in myocardial I/R injury. In this regard, an analysis of proteomics analysis was performed to identify the potential substrates of MYSM1 in cardiomyocytes transfected with Flag-EV or Flag-MYSM1 plasmids...
ORGANISM(S): Mus musculus (Mouse) 
2024-12-13 | PXD058830 | Pride
Heart Proteomics analysis Mice 
ProteomicsHuman dermal fibroblasts histone H4
Core histone proteins collected from normal human dermal fibroblasts were separated using a 2-dimensional reverse phase hydrophilic interaction liquid chromatography (RP-HILIC) system. Histone H4 isolated in the first dimension of the separation was analyzed using an LTQ Orbitrap Velos with a resolu...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2018-02-11 | MSV000082054 | MassIVE
TranscriptomicsMicroRNA expression profile in Newcastle disease virus-infected HeLa cells
Three small RNA libraries constructed from uninfected HeLa cells or the cells infected with NDV strain Herts/33 at 6 and 12 hr post inoculation were sequenced using an Illumina platform.Three replicates of each group (Mock, NDV-6h and NDV-12h) were prepared and pooled separately for library construc...
ORGANISM(S): Homo sapiens 
2020-11-08 | E-MTAB-9690 | biostudies-arrayexpress
Proteomics20170127_Zhe_MCF7_TDCID_200min
This top-down MS data set was generated from MCF-7 cells. MCF-7 cells were obtained from American Tissue Culture Collection (ATCC) and maintained in minimum essential media with 5% charcoal-dextran treated fetal calf serum. In the MS experiment, soluble MCF-7 intact proteins were separated using the...
ORGANISM(S): Mcf7 
2018-02-12 | MSV000082061 | MassIVE
ProteomicsEscherichia coli K-12 CIDETD
Protein extract of Escherichia coli K-12 MG1655 was separated by RPLC on a Waters NanoAquity system with a custom packed C5 column and analyzed by an LTQ Orbitrap Velos mass spectrometry. Parent spectra were collected at a 60000 resolution and the top 4 ions were selected for LC-MS/MS analysis in wh...
ORGANISM(S): Escherichia Coli K-12 (ncbitaxon:83333) 
2018-04-04 | MSV000082237 | MassIVE
ProteomicsTandem mass tag-based proteomic profiling of drainage fluid
Anastomotic leakage (AL), one of the most severe complications in rectal surgery, is often diagnosed late because of the low specificity of clinical symptoms and limitations of current clinical investigations. Identification of patients with early AL remains challenging. Here, we explored the protei...
ORGANISM(S): Homo Sapiens 
PXD043410 |
ProteomicsTMT labeling quantitative LC-MS of ocluar adnexal B-cell lymphomas and controls
Ocular adnexal B-cell lymphoma (OABL) is a rare subtype of non-Hodgkin lymphoma. TMT labeling quantitative proteome were performed on 39 OABL, 9 idiopathic orbital inflammation, 6 reactive lymphoid hyperplasia, and 11 aesthetic orbital plastic surgery specimens. Complete clinicopathologic and progno...
ORGANISM(S): Homo Sapiens 
2022-10-18 | PXD037537 |
UnknownRobust estimation of bacterial cell count from optical density.
Not available
S-EPMC7499192 | biostudies-literature
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