Liu Y S YS - OmicsDI

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Unknown (528)
Transcriptomics (51)
Genomics (27)
Proteomics (12)
Metabolomics (9)

Organisms

Homo sapiens (46)
Mus musculus (17)
Arabidopsis thaliana (4)
Oncorhynchus mykiss (3)
Rattus norvegicus (3)
Urocitellus parryii (2)
Boehmeria nivea (1)
Trichinella spiralis (1)
Gossypium hirsutum (1)
Macaca mulatta (1)
Chlamydomonas reinhardtii (1)
Staphylococcus epidermidis (1)
Streptococcus suis (1)
Apis mellifera (1)
Zea mays (1)
Schizosaccharomyces pombe (1)
Nicotiana tabacum (1)
Solanum lycopersicum (1)
Saccharomyces cerevisiae (1)
Sus scrofa (1)
Danio rerio (1)
Sophora alopecuroides (1)

Repository

biostudies-arrayexpress (65)
EGA (13)
pride (12)
MetaboLights (9)

Tissue

B cell (1)
Blood (1)
Blood plasma (1)
Cell culture (1)
Cerebrospinal fluid (1)
Leaf (1)
Liver (1)
Pancreatic duct (1)
Permanent cell line cell (1)
Root (1)
Testis (1)

Disease

Acute leukemia (1)
Adenocarcinoma (1)
Carcinoma (1)
Prostate adenocarcinoma (1)

Technology Type

Mass Spectrometry (12)
Mass spectrometry (7)
Bottom-up proteomics (3)
SWATH MS (3)
Shotgun proteomics (3)
Affinity proteomics (2)
Olink affinity proteomics (2)
Aperio (1)
Mass spectrometry assay (1)
NMR spectroscopy (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (3)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - negative - reverse phase (2)
Bruker (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - reversed-phase-chromatography (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - positive - reversed-phase-chromatography (1)
MS Imaging - (1)
UPLC-Q-TOF/MS (Negative) (1)
UPLC-Q-TOF/MS (Positive) (1)

Publication Date

2014 (25)
2013 (13)
2012 (11)
2015 (6)
2011 (5)
2010 (5)
2026 (4)
2023 (3)
2017 (3)
2024 (2)
2022 (2)
2021 (2)
2020 (2)
2025 (2)
2019 (1)

CHEBI ID

CHEBI:15354 (3)
CHEBI:15428 (3)
CHEBI:16015 (3)
CHEBI:16737 (3)
CHEBI:16919 (3)
CHEBI:17821 (3)
CHEBI:18050 (3)
CHEBI:22660 (3)
CHEBI:29016 (3)
CHEBI:30769 (3)
CHEBI:73024 (3)
CHEBI:12962 (2)
CHEBI:15318 (2)
CHEBI:15355 (2)
CHEBI:15611 (2)
CHEBI:15698 (2)
CHEBI:15721 (2)
CHEBI:15753 (2)
CHEBI:15756 (2)
CHEBI:15765 (2)
CHEBI:15784 (2)
CHEBI:15859 (2)
CHEBI:15971 (2)
CHEBI:15978 (2)
CHEBI:16024 (2)
CHEBI:16040 (2)
CHEBI:16108 (2)
CHEBI:16196 (2)
CHEBI:16264 (2)
CHEBI:16265 (2)

Metabolite Name

5'-deoxyadenosine (2)
Choline (2)
Citric acid (2)
Creatine (2)
Creatinine (2)
D-glucosamine 6-phosphate (2)
D-glucose (2)
Glycine (2)
L-glutamic acid (2)
L-glutamine (2)
L-pipecolic acid (2)
Thymidine (2)
Thymine (2)
((4r)-4-((3r,5s,7r,9s,10s,12s,13r,14s,17r)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1h-cyclopenta[a]phenanthren-17-yl)pentanoyl)glycylglycine (1)
(+)-alpha-tocopherol (1)
(+)-chlorpheniramine (1)
(+-)5,6-DHET (1)
(-)-caryophyllene oxide (1)
(-)-cotinine (1)
(1R,2R,3S,1′R)-nepetalinic acid (1)
(2e,4e)-12-hydroxy-13-(hydroxymethyl)-3,5,7-trimethyltetradeca-2,4-dienedioic acid (1)
(2r,3r,4r,6ar,6bs,8as,11r,12r,12as,14br)-2,3,12-trihydroxy-4,6a,6b,11,12,14b-hexamethyl-8a-[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxycarbonyl-1,2,3,4a,5,6,7,8,9,10,11,12a,14,14a-tetradecahydropicene-4-carboxylic acid (1)
(2s,3r,4s,6ar,6bs,8as,12as,14br)-2-acetyloxy-8a-[(2s,3r,4s,5s,6r)-6-[[(2r,3r,4r,5s,6r)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxymethyl]-4,5-dihydroxy-3-[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxycarbonyl-3-hydroxy-4,6a,6b,11,11,14b-hexamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicene-4-carboxylic acid (1)
(3S)-3-hydroxy-3-methylglutaryl-CoA (1)
(3r,5s,7r,9s,10s,12s,13r,14s,17r)-17-((2r)-7-hydroxy-6-methylheptan-2-yl)-10,13-dimethylhexadecahydro-1h-cyclopenta[a]phenanthrene-3,7,12-triol (1)
(3r,7r,9s,10s,12s,13r,14s,17r)-17-((2r)-6,7-dihydroxy-6-methylheptan-2-yl)-10,13-dimethylhexadecahydro-1h-cyclopenta[a]phenanthrene-3,7,12-triol (1)
(9z,12z,15z-octadecatrienoyl) coenzyme a (1)
(N(omega)-L-arginino)succinic acid (1)
(R)-3-(4-hydroxyphenyl)lactic acid (1)
(R)-3-hydroxybutyrate (1)

Modification

Not available (1)

Study type

Transcription profiling by array (22)
RNA-seq of coding RNA (13)
ChIP-seq (7)
Methylation profiling by high throughput sequencing (7)
Other (5)
RNA-seq of non coding RNA (5)
ChIP-chip by tiling array (2)
Comparative genomic hybridization by array (2)
Transcription profiling by high throughput sequencing (1)
Methylation profiling by array (1)

Release Date

2025 (60)
2022 (51)
2024 (50)
2020 (50)
2023 (46)
2014 (45)
2021 (44)
2018 (36)
2017 (32)
2015 (30)
2016 (30)
2013 (28)
2012 (24)
2011 (21)
2019 (20)
2010 (12)
2026 (8)
2008 (4)
2009 (1)
2006 (1)

Lab affiliation

Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, CH-8093 Zurich, Switzerland. Faculty of Science, University of Zurich, CH-8057 Zurich, Switzerland (2)
Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot 76100, Israel (2)
The First Affiliated Hospital of Fujian Medical University (2)
Baylor College of Medicine (1)
Biotechnology Center, National Chung-Hsing University, Taichung 402, Taiwan (1)
Department of Biochemistry and Structural Biology, UT Health San Antonio, San Antonio, TX 78922 (1)
Divisions of Pulmonary Biology, Molecular Cardiovascular Biology and Developmental Biology Department of Pediatrics Cincinnati Children's Hospital Medical Center Cincinnati, OH 45229 (1)
Key Laboratory of Modern Molecular Breeding of Advantageous Crops of Ningxia, School of Agriculture, Ningxia University, Yinchuan, Ningxia 750021, China (1)
kyungpook national university (1)

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Safety, tolerability, and immunogenicity of PIKA-adjuvanted recombinant SARS-CoV-2 spike protein subunit vaccine in healthy adults: an open-label randomized phase I clinical trial.

Not available

S-EPMC11543792 | biostudies-literature

A flavonoid derivative of icariside II (YS-10) improves erectile dysfunction in radiation-injured rats via oxidative stress pathway.

Not available

S-EPMC9262736 | biostudies-literature

Functional analysis of the heterotrimeric NF-Y transcription factor complex in cassava disease resistance.

Not available

S-EPMC6943695 | biostudies-literature

A group of nuclear factor Y transcription factors are sub-functionalized during endosperm development in monocots.

Not available

S-EPMC5920288 | biostudies-literature

Roux-en-Y Gastric Bypass Versus Medical Treatment for Type 2 Diabetes Mellitus in Obese Patients: A Systematic Review and Meta-Analysis of Randomized Controlled Trials.

Not available

S-EPMC4998704 | biostudies-literature

Brd4 and JMJD6-associated Anti-pause Enhancers in Regulation of Transcriptional Pause Release

Distal enhancers characterized by H3K4me1 mark play critical roles in developmental and transcriptional programs. However, potential roles of specific distal regulatory elements in regulating RNA Polymerase II (Pol II) promoter-proximal pause release remain poorly investigated. Here we report that a...

ORGANISM(S): Homo sapiens

2014-01-14 | E-GEOD-51633 | biostudies-arrayexpress

Modulation of liver metabolism and gut microbiota by Alhagi-honey alleviated heat stress-induced liver damage

Alhagi-honey (AH) is a well-established traditional ethnic medicine with advantageous effects against diarrhea and headaches. We aim to explore the preventive effect of AH on liver damage induced by heat stress (HS) and its underlying mechanism. HS models were established by thermostat, and mice ...

2024-09-23 | MTBLS10021 | MetaboLights

Considerations for peptide and protein error rate control in large-scale targeted DIA analyses: plasma analysis

Liquid chromatography coupled to tandem mass spectrometry has become the main method for high-throughput identification and quantification of peptides and the inferred proteins. Discovery proteomics commonly employs data-dependent acquisition in combination with spectrum-centric analysis. The accumu...

ORGANISM(S): Homo sapiens (Human)

2017-08-03 | PXD006625 | Pride

Near-Complete Genome Sequence of Zygosaccharomyces rouxii NRRL Y-64007, a Yeast Capable of Growing on Lignocellulosic Hydrolysates.

Not available

S-EPMC9119105 | biostudies-literature

Regulatory role of SrrAB two-component system in Staphylococcus epidermidis growth and biofilm formation

Biofilm formation is considered the most important factor involved in pathogenicity of Staphylococcus epidermidis.We investigated the role of two-component signal transduction system (TCS) srrAB, which was up-regulated under micro-aerobic condition, in the growth and biofilm formation of S. epidermi...

ORGANISM(S): Staphylococcus epidermidis

2014-11-21 | E-GEOD-47101 | biostudies-arrayexpress

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627 Results

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