Logan B B - OmicsDI

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Homo sapiens (133)
Mus musculus (50)
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biostudies-arrayexpress (196)
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Publication Date

2014 (36)
2013 (28)
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2005 (1)
2004 (1)
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CHEBI ID

CHEBI:100241 (1)
CHEBI:10043 (1)
CHEBI:10588 (1)
CHEBI:113 (1)
CHEBI:12962 (1)
CHEBI:131700 (1)
CHEBI:131991 (1)
CHEBI:132553 (1)
CHEBI:132556 (1)
CHEBI:132703 (1)
CHEBI:13332 (1)
CHEBI:136619 (1)
CHEBI:138519 (1)
CHEBI:138532 (1)
CHEBI:138736 (1)
CHEBI:138768 (1)
CHEBI:138800 (1)
CHEBI:138860 (1)
CHEBI:14336 (1)
CHEBI:143728 (1)
CHEBI:145120 (1)
CHEBI:149658 (1)
CHEBI:15245 (1)
CHEBI:15318 (1)
CHEBI:15354 (1)
CHEBI:15356 (1)
CHEBI:15414 (1)
CHEBI:154829 (1)
CHEBI:15553 (1)
CHEBI:155825 (1)

Metabolite Name

(+)-Catechin (1)
(+/-)-cis,trans-abscisic acid (1)
(-)-Epicatechin (1)
(-)-Riboflavin (1)
(2E)-3,4,4,5,5,6,6,7,7,8,8,8-Dodecafluoro-2-octenoic acid (1)
(R)-(-)-Phenylephrine (1)
(S)-(+)-Citramailc acid (1)
(S)-3-Amino-5-methylhexanoic acid (1)
1,3-Dihydroxyacetone dimer (1)
1,4-Androstadiene-3,17-dione (1)
1-(3-Chlorophenyl)piperazine (1)
1-Aminocyclopropane-1-carboxylic acid (1)
1-Isothiocyanato-6-(methylsulfonyl)-hexane (1)
1-Isothiocyanato-7-(methylsulfinyl)-heptane (1)
1-Isothiocyanato-8-(methylsulfinyl)-octane (1)
1-Isothiocyanato-9-(methylsulfinyl)-nonane (1)
1-Methylnicotinamide (1)
1-O-beta-D-Glucopyranosyl sinapate (1)
11,12-EET (1)
12-HEPE (1)
13-HOTrE(r) (1)
17-HDoHE (1)
1H-indole-3-carboxylic acid (1)
2',2'-Difluoro-2'-deoxyuridine (1)
2'-Deoxyadenosine (1)
2'-Deoxyadenosine 5'-monophosphate (1)
2'-Deoxycytidine (1)
2'-Deoxycytidine 5'-diphosphate (1)
2'-Deoxyinosine 5'-monophosphate (1)
2'-Deoxyuridine 5'-monophosphate (1)

First Public Date

2014 (2)
2016 (1)

Study type

Transcription profiling by array (128)
RNA-seq of coding RNA (21)
ChIP-seq (18)
Unknown experiment type (4)
Comparative genomic hybridization by array (4)
RNA-seq of non coding RNA (4)
Methylation profiling by array (3)
MicroRNA profiling by array (2)
Transcription profiling by SAGE (1)
Differential (1)
RIP-chip by array (1)
ChIP-chip by tiling array (1)
Cell line - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Transcription profiling by tiling array (1)
RNAi profiling by array (1)
MicroRNA profiling by high throughput sequencing (1)
Other (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (101)
2023 (94)
2021 (92)
2024 (83)
2025 (80)
2014 (74)
2018 (72)
2020 (68)
2019 (64)
2015 (59)
2013 (52)
2016 (48)
2012 (43)
2011 (38)
2017 (32)
2010 (27)
2008 (24)
2009 (23)
2007 (13)
2026 (11)
2006 (7)
2004 (4)
2000 (2)
1998 (2)
2005 (1)
2001 (1)

Lab affiliation

National Engineering Research Center for the Emergency Drug, Beijing Institute of Pharmacology and Toxicology, Beijing 100850, China (3)
Foetal Exposure Group School of Clinical Sciences University of Bristol United Kingdom (2)
Wellcome Trust Sanger Institute (2)
Archaea Biology and Ecogenomics Division University of Vienna (1)
BK21 Plus KNU Multi-Omics based Creative Drug Research Team, College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Republic of Korea (1)
BK21 Plus KNU Multi-Omics-based Creative Drug Research Team, College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Republic of Korea (1)
Department of Biochemistry, University of Cambridge, United Kingdom (1)
Department of Bioinformatics, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China (1)
Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology and College of Medicine or College of Pharmacy, Seoul National University, Seoul, 03080, South Korea (1)
Departmentof Biochemistry & Structural Biology Lund University, Sweden (1)
Division of Biochemistry and Structural Biology, Department of Chemistry, Lund University, SE-22362, Lund, Sweden (1)
Florida State University (1)
Head of System Biology Lab. at Lopukhin Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency (1)
Keck MS & Proteomics Resource Yale School of Medicine (1)
The Pirbright Institute, Woking, Surrey, GU24 0NF, UK (1)
universitetslektor (1)

Tags

xref:PubMed:18923939 (1)

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Gene expression data of BCR-ABL1 transformed B cell precursors from BCL6 wild-type and BCL6 knockout mice

To elucidate the mechanism of BCL6-mediated pre-B cell survival signaling, we investigated the gene expression pattern in BCR-ABL1-transformed BCL6+/+ and BCL6-/- B cell precursors. Pharmacological inhibition of BCR-ABL1 was performed with the BCR-ABL1 kinase inhibitor STI571 (Imatinib). BCR-ABL1 t...

ORGANISM(S): Mus musculus

2010-05-27 | E-GEOD-20987 | biostudies-arrayexpress

The forkhead transcription factor FOXP1 profile in B-cells and B-cell lymphoma cell lines

Expression of the forkhead transcription factor FOXP1 is essential for early B cell development, whereas downregulation of FOXP1 at the germinal center (GC) stage is required for GC B cell function. Aberrantly high FOXP1 expression is frequently observed in diffuse large B cell lymphoma (DLBCL) and ...

ORGANISM(S): Homo sapiens

2015-05-19 | E-GEOD-69009 | biostudies-arrayexpress

Genome-wide expression analysis of genes regulated in primary human B cell and PBMC co-cultures stimulated with anti-IgM and superantigens

Illumina microarray analysis of primary human B cell and peripheral blood mononuclear cell (PBMC) co-cultures stimulated with anti-IgM and superantigens for 3 days (BT) compared to the same co-cultures without stimualtion (BTNo). Total RNA was extracted from co-cultures after 3 days in the presence ...

ORGANISM(S): Homo sapiens

2012-12-26 | E-GEOD-42567 | biostudies-arrayexpress

B Type and Complex A/B Type Epicatechin Trimers Isolated from Litchi pericarp Aqueous Extract Show High Antioxidant and Anticancer Activity.

Not available

S-EPMC5796246 | biostudies-literature

Revisiting the Logan plot to account for non-negligible blood volume in brain tissue.

Not available

S-EPMC5561763 | biostudies-literature

Role of Glycosyltransferases Modifying Type B Flagellin of Emerging Hypervirulent Clostridium difficile Lineages and Their Impact on Motility and Biofilm Formation.

Not available

S-EPMC5207246 | biostudies-literature

Health promotion in emerging collectivist communities: A study of dietary acculturation in the South Sudanese community in Logan City, Australia.