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TranscriptomicsRNA m5C Methylation in breast cancer using MeRIP-Seq
RNA m5C methylation profile of MCF10A and MDA486 by using MeRIP-Seq protocol Immunoprecipitation of Methylated mRNA at Cytosine (m5C) residues: Affinity purified of anti-methyl cytosine (m5C) polyclonal antibody 7ug (Zymo Research, Catalog#A3001-50) was conjugated with protein-A magnetic beads for 2...
ORGANISM(S): Homo sapiens 
2014-02-20 | E-GEOD-53370 | biostudies-arrayexpress
GenomicsProtocol for detecting m5C RNA modification at single-base resolution using m5C-TAC-seq
Protocol for detecting m5C RNA modification at single-base resolution using m5C-TAC-seq
PRJNA1166655 | ENA
Genomicsm5C-MeRIP-seq of HHL5 cells
m5C-MeRIP-seq of HHL5 cells
PRJNA1276545 | ENA
GenomicsTET2 regulates histone H2AK119ub and leukemogenesis through LTR RNA m5C oxidation [seq_RNA-caRNA-m5C-MeRIP]
TET2 regulates histone H2AK119ub and leukemogenesis through LTR RNA m5C oxidation [seq_RNA-caRNA-m5C-MeRIP]
PRJNA1007666 | ENA
Proteomicsm5C RNA methylation modified or unmodified DNA:RNA hybrids pulldown
The biotin labeled DNA:RNA hybrids with or without RNA m5C modification were incubated with lysates of 293 cells treated with H2O2, and were pulled down by Streptavidin. The proteins pulled down by the empty beads control, unmodified or m5C-modified hybrids were analyzed by mass spectrometry
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2022-04-29 | MSV000089337 | MassIVE
GenomicsTranscriptome m5C MeRIP-seq of human Huh7 cells
Transcriptome m5C MeRIP-seq of human Huh7 cells
PRJNA952262 | ENA
ProteomicsMS-based analysis of enzymatic methylation of an in vitro-transcribed lncRNA
The field of epitranscriptomics is growing in importance, with chemical modification of RNA being associated with a wide variety of biological phenomena. Mass spectrometry (MS) enables the identification of modified RNA residues within their sequence contexts, by using analogous approaches to shotgu...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2020-03-31 | PXD016308 | Pride
5-methylcytidine Rna Epitranscriptomics Lncrna M5c Nme1 
ProteomicsMS-based analysis of enzymatic methylation of an in vitro-transcribed lncRNA
The field of epitranscriptomics is growing in importance, with chemical modification of RNA being associated with a wide variety of biological phenomena. Mass spectrometry (MS) enables the identification of modified RNA residues within their sequence contexts, by using analogous approaches to shotgu...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2018-12-31 | PXD012095 | Pride
5-methylcytidine Rna Epitranscriptomics Lncrna M5c Nme1 
Genomicsm5C MeRIP sequencing in PANC-1 cells to map the m5C methylome of PANC-1 cells treated with CAF-derived Evs
m5C MeRIP sequencing in PANC-1 cells to map the m5C methylome of PANC-1 cells treated with CAF-derived Evs
PRJNA1100438 | ENA
Unknownm5C-Atlas: a comprehensive database for decoding and annotating the 5-methylcytosine (m5C) epitranscriptome.
Not available
S-EPMC8728298 | biostudies-literature
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