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ProteomicsComparison of affinity enrichment methods for O-GlcNAc proteomics
In this work, by using the lysates of PANC-1 (a pancreatic cancer cell line), we provided a head-to-head comparison of three affinity enrichment methods/materials (i.e., antibody, lectin AANL6, and an OGA mutant) for O-GlcNAc proteomics. The enrichment was performed before or after high-pH HPLC frac...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Saccharomyces Cerevisiae (ncbitaxon:4932) 
2024-04-23 | MSV000094604 | MassIVE
ProteomicsComprehensive evaluation of cleavable bioorthogonal probes for site-specific O-GlcNAc proteomics
O-linked β-N-acetylglucosamine (O-GlcNAc) modification (i.e., O-GlcNAcylation) on proteins is an essential modification in physiology and pathology. Although O-GlcNAcylation is functionally critical, its analysis has never been an easy task. Despite the existence of a number of methods developed in ...
ORGANISM(S): Mus musculus (Mouse) 
2025-10-20 | PXD063995 | Pride
Mouse brain O-glcnac Click chemistry Lc-ms/ms 
TranscriptomicsA Comparison of microarray and MPSS Technology Platforms for Expression Analysis of Arabidopsis
A comparison of microarray and MPSS technologies can help to establish the metrics for data comparisons across these technology platforms and determine some of the factors affecting the measurement of mRNA abundances using different platforms. Here, different Treatments/Conditions based on differen...
ORGANISM(S): Arabidopsis thaliana 
2007-09-14 | E-GEOD-8994 | biostudies-arrayexpress
ProteomicsIdentification of Tufm-interacting proteins by IP-MS/MS
Tufm-FLAG and its interacting proteins were enriched by immunoprecipitation using Anti-C-Flag Nanobody Agarose Beads. Then, Tufm-FLAG-interacting proteins were identified by mass spectrum.
ORGANISM(S): Homo sapiens (Human) 
2026-03-02 | PXD045404 | Pride
Mouse Mitochondria Ip-ms/ms Tufm 
UnknownOptical control of membrane tethering and interorganellar communication at nanoscales.
Not available
S-EPMC5606013 | biostudies-literature
ProteomicsQuantitative Proteome and Lysine Lactylome of Proteins in the Cortex of Sham and CCI Mouse
Quantitative proteome and lysine lactylome analyses were conducted on proteins extracted from the cortex of sham and controlled cortical impact (CCI) mice.
ORGANISM(S): Mus musculus (Mouse) 
2026-03-02 | PXD045802 | Pride
Mouse Lactylation Cortex 
ProteomicsChemical derivatization of histones for LC-MS/MS analysis
Histone lysine methylation is an important post-translational modifications (PTMs) that plays critical roles in numerous biological processes with abnormal histone lysine methylation having been associated with developmental defects and human diseases. The primary amine of all lysine residues can be...
ORGANISM(S): Homo sapiens (Human) 
2022-04-04 | PXD028269 | Pride
Dimethyl labeling Propionylation Histone Histione methylation 
ProteomicsSARS-CoV-2 spike protein glycosylation enriched by HILIC and Ti-IMAC
In this work, we performed a fully descriptive analysis N- and O- linked glycosylation of SARS-COV-2 S glycoprotein. We investigated that dual-functionalized Ti-IMAC material enable the simultaneous enrichment and separation of neutral and sialyl glycopeptides of a recombinant SARS-CoV-2 S glycoprot...
ORGANISM(S): Homo sapiens (Human) 
2022-01-11 | PXD026450 | Pride
Sars-cov-2 Spike protein 
UnknownPolo-like kinase 1 coordinates biosynthesis during cell cycle progression by directly activating pentose phosphate pathway.
Not available
S-EPMC5686148 | biostudies-literature
UnknownTwisting, untwisting, and retwisting of elastic Co-based nanohelices.
Not available
S-EPMC10363140 | biostudies-literature
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