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TranscriptomicsDifferentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
Drought tolerance is a key trait for increasing and stabilizing barley productivity in dry areas worldwide. Identification of the genes responsible for drought tolerance in barley (Hordeum vulgare L.) will facilitate understanding of the molecular mechanisms of drought tolerance, and also genetic im...
ORGANISM(S): Hordeum vulgare 
2009-05-13 | E-GEOD-15970 | biostudies-arrayexpress
TranscriptomicsDefinition of the Pseudomonas aeruginosa Anr and Dnr Regulons
The anaerobic metabolism of the opportunistic pathogen Pseudomonas aeruginosa is important for growth and survival during persistent infections. The two Fnr-type transcription factors Anr and Dnr regulate different parts of the underlying network. Both are proposed to bind to a non-distinguishable D...
ORGANISM(S): Pseudomonas aeruginosa 
2010-07-07 | E-GEOD-17179 | biostudies-arrayexpress
TranscriptomicsGene expression data from P. gingivalis infected Mouse
The objectives of this investigation were to examine changes in the host transcriptional profiles during a Porphyromonas gingivalis infection using a murine calvarial model of inflammation and bone resorption. P. gingivalis strain 381 was injected into the subcutaneous soft tissue over the calvaria...
ORGANISM(S): Mus musculus 
2010-07-15 | E-GEOD-17110 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of wild type, lasR rhIR and rpoS Pseudomonas aeruginosa mutants treated with acyl-HSL to investigage quorum sensing during the logarithmic phase of growth
Effect of acyl-HSL signal or ectopic lasR, rhlR, or rpoS expression on the advancement of quorum sensing gene expression during the logarithmic phase of growth
ORGANISM(S): Pseudomonas aeruginosa 
2007-08-10 | E-MEXP-1183 | biostudies-arrayexpress
ProteomicsVirus impact on proteome of H. annosum isolates
Circular agar plugs with fresh mycelium of H. annosum isolates were inoculated onto the center of 9-cm Petri plates containing 2% MEA (malt extract agar) and incubated at 22°C in the dark. Presence of viruses in H. annosum isolates used for the experiment: –1W, isogenic isolates fully cured of vir...
ORGANISM(S): Heterobasidion annosum 
2024-09-11 | PXD045991 | Pride
Biotic interaction Virus Fungi 
TranscriptomicsTranscription profiling of mouse Sod2-/- and Sod2+/+ erythroblasts.
The mitochondrial superoxide dismutase (SOD2) is a major antioxidant protein which detoxifies superoxide anion radicals generated by mitochondrial respiration (Weisiger and Fridovich, J. Biol. Chem. 1973). We designed a model of oxidative stress-induced anemia caused by SOD2-deficiency (Friedman et...
ORGANISM(S): Mus musculus 
2008-10-25 | E-GEOD-8726 | biostudies-arrayexpress
TranscriptomicsExpression of cyclophilin B is associated with malignant progression and regulation of genes
Microarray was conducted on Illumina Human Ref-6 Version 2 Expression Chip (Illumina, San Diego, CA). Three independent cultures were used for RNA isolation with RNeasy plus mini kit (Qiagen, Valencia, CA). RNA quality was checked by Agilent Bioanalyzer (Agilent, Santa Clara, CA). An Ambion labelin...
ORGANISM(S): Homo sapiens 
2009-04-03 | E-GEOD-15505 | biostudies-arrayexpress
ProteomicsBioID proximity labelling of MAP4K4 interactors in DAOY medulloblastoma cells
Mitogen-activated protein kinase kinase kinase kinase 4 (MAP4K4) is Ser/Thr protein kinase highly expressed in medulloblastoma (MB) patient samples which promotes cell migration and invasiveness downstream of growth factor receptors. Although MAP4K4 implication in the control of the membrane protrus...
ORGANISM(S): Homo sapiens (Human) 
2022-08-04 | PXD031870 | Pride
Bioid Medulloblastoma Map4k4 
ProteomicsBioID proximity labelling of MAP4K4 interactors in HEK-293T cells
Mitogen-activated protein kinase kinase kinase kinase 4 (MAP4K4) is Ser/Thr protein kinase highly expressed in medulloblastoma (MB) patient samples which promotes cell migration and invasiveness downstream of growth factor receptors. Although MAP4K4 implication in the control of the membrane protrus...
ORGANISM(S): Homo sapiens (Human) 
2022-08-04 | PXD031863 | Pride
Bioid Map4k4 
UnknownA large language model for electronic health records.
Not available
S-EPMC9792464 | biostudies-literature
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