Sort   by:  
 Page size 
ProteomicsIdentification of neoantigens in oesophageal adenocarcinoma
We present data from tissues of seven oesophageal adenocarcinomas of CD4 and CD8 T cell epitopes eluted from the cell surface using mass spectrometry (immunopeptidomics) of presented HLA bound peptides.This dataset forms part of the publication:Nicholas, B., Bailey, A., McCann, K.J., Wood, O., Walke...
ORGANISM(S): Homo sapiens (Human) 
2022-09-27 | PXD031108 | Pride
Human Oesophageal adenocarcinoma Immunopeptidome Hla 
ProteomicsDNA damage-induced alternative splicing of p53
Samples were reduced in loading buffer and separated by SDS-PAGE for 3-4 min followed by in-gel digestion with trypsin. Digests were analyzed by LC-MS/MS using a Waters nanoACQUITY interfaced to a Thermo Fusion Lumos MS. The LC separation 90 min gradient of 5-30% MeCN in a trapping configurations w...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2020-12-30 | MSV000086651 | MassIVE
GenomicsChIP-seq of wild-type SOX18 and a dominant-negative variant (SOX18RaOp) in HeLa cells
We investigated differences in the chromatin-binding profile of SOX18 (mouse) and its dominant-negative isoform SOX18RaOp, and how SOX18RaOp alters the binding location of SOX18. HeLa cells were transfected to generate 3 different conditions: 1. myc-SOX18, 2. myc-SOX18RaOp and 3. myc-SOX18 with unta...
ORGANISM(S): Homo sapiens 
2021-08-30 | E-MTAB-10609 | biostudies-arrayexpress
UnknownThe Effects of Human Immunodeficiency Virus Type 1 (HIV-1) Antigen-Expanded Specific T-Cell Therapy and Vorinostat on Persistent HIV-1 Infection in People With HIV on Antiretroviral Therapy.
Not available
S-EPMC10938201 | biostudies-literature
ProteomicsMulti-compartment quantitative proteomics revealing potential mechanisms underlying the treatment effects of mesenchymal-derived extracellular vesicles in a monkey model of cortical injury
Cortical injury frequently causes motor dysfunction, significantly impairing activities of daily living, and currently, there are no effective therapeutic options available. Previous studies demonstrated that intravenous infusion of mesenchymal stromal cell-derived extracellular vesicles (MSC-EVs) e...
ORGANISM(S): Macaca mulatta (Rhesus macaque) 
2026-06-15 | PXD059286 | Pride
Mesenchymal stromal cell-derived extracellular vesicles Cortical injury Rhesus macaque Brain tissue Plasma Csf Lc-ms/ms 
UnknownFLASH Radiotherapy for the Treatment of Symptomatic Bone Metastases (FAST-01): Protocol for the First Prospective Feasibility Study.
Not available
S-EPMC9893728 | biostudies-literature
ProteomicsSystems biology of blood and tissue for comprehensive analysis of immune response to hepatitis B vaccine in adults
Protein concentrations of both lysed WBC and plasma samples were measured by the PierceTM Bradford Assay and normalized to contain 10 μg per sample before proceeding with sample digestion using the procedure as previously described44. Peptides were desalted using STop-And-Go Extraction tips (STAGE t...
ORGANISM(S): Homo sapiens (Human) 
2020-12-01 | PXD020474 | Pride
Tissue Blood Systems biology Hepatitis b vaccone 
UnknownSphingosine-1-Phosphate Receptor Modulator, FTY720, Improves Diastolic Dysfunction and Partially Reverses Atrial Remodeling in a Tm-E180G Mouse Model Linked to Hypertrophic Cardiomyopathy.
Not available
S-EPMC6857720 | biostudies-literature
UnknownChange in Neighborhood Socioeconomic Status and Weight Gain: Dallas Heart Study.
Not available
S-EPMC4476924 | biostudies-literature
ProteomicsMaize and Arabidopsis Golgi proteome
Comparative proteomics of ER-Golgi membranes from etiolated coleoptiles of maize (Zea mays) and young leaves of Arabidopsis (Arabidopsis thaliana) isolated by flotation centrifugation demonstrate differences in the complement of synthases and glycosyl transferases unique to the type of wall made. Ad...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Zea mays (Maize) 
2019-04-11 | PXD007612 | Pride
Flotation centrifugation Lc-msms Golgi Triple tof Arabidopsis Maize Ffe Free-flow electrophoresis 
Sort   by:  
 Page size