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TranscriptomicsThe transcription factors Pcr1 and Atf1 have distinct roles in stress- and Sty1-dependent gene regulation
Gene expression was monitored in the knockout of two transcription factors, Pcr1 and Atf1, in the presence and absence of oxidative stress induced by KCl.
ORGANISM(S): Schizosaccharomyces pombe 
2008-03-03 | E-TABM-447 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling of Escherichia coli during a transition from zinc starvation to surfeit
Escherichia coli strain MG1655 was grown in a Zn-depleted custom-built chemostat. Culture volume (120 ml), temperature (37 oC) and stirring speed (440 rpm) were maintained. Steady state values for pH and OD600 were 6.9 and 0.6, respectively. Chemostats were grown for 50 h to allow five culture vo...
ORGANISM(S): Escherichia coli 
2011-12-01 | E-GEOD-26187 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling of Escherichia coli cultured under severe zinc limitation
Escherichia coli strain MG1655 was grown in parallel chemostat cultures in GGM. In one chemostat the culture was fed adequate Zn; in the other, measures were taken to eliminate Zn from the chemostat vessel and culture medium. Culture volume (120 ml), temperature (37 oC) and stirring speed (437 rpm...
ORGANISM(S): Escherichia coli 
2010-06-25 | E-GEOD-11894 | biostudies-arrayexpress
TranscriptomicsAge Map, Cerebellum (A)
To assess the transcriptional changes in different brain regions and spinal cord associated with aging and either a caloric restricted (CR) or ad libitum (AL) diet. cDNA microarray and quantitative PCR analyses were used to examine the transcriptomes of various neuronal tissues in young, middle aged...
ORGANISM(S): Mus musculus 
2009-06-21 | E-GEOD-8409 | biostudies-arrayexpress
TranscriptomicsPAO1-1037
Gene expression in biofilms of PAO1 with and without the presence of 20 ug/ml peptide 1037 was analysed using microarrays.
ORGANISM(S): Pseudomonas aeruginosa 
2012-04-19 | E-MTAB-962 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila developmental time series
Michelle N. Arbeitman, Eileen E. M. Furlong, Farhad Imam, Eric Johnson, Brian H. Null, Bruce S. Baker, Mark A. Krasnow, Matthew P. Scott, Ronald W. Davis and Kevin P. White. Gene Expression During the Life Cycle of Drosophila melanogaster, Science, 297: 2270-2275, 2002. This work can be accessed fro...
ORGANISM(S): Drosophila melanogaster 
2004-11-06 | E-FLYC-6 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Rhizobium leguminosarum supressor strain RU2386 and gltb mutant compared to the wild type
Comparison of supressor strain RU2386 and gltB mutant (RU2307) to wildtype 3841 of Rhizobium leguminosarum
ORGANISM(S): Rhizobium leguminosarum 
2008-02-02 | E-MEXP-1404 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Rhizobium leguminosarum bv viciae strain 3841 grown on AMS minimal media with succinate and ammonia compared to succinate GABA
Rhizobium leguminosarun bv viciae strain 3841 was grown on AMS minimal medium with sucinate and ammonia and compared to a culture grown on succinate GABA
ORGANISM(S): Rhizobium leguminosarum 
2008-11-10 | E-MEXP-1894 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Rhizobium leguminosarum grown in minimal medium with or without the addition of salt
Grow strain 3841 on AMS minimal medium with glucose 10mM and ammonium chloride 10 mM and compare it to the same growth conditions but plus 100 mM NaCl
ORGANISM(S): Rhizobium leguminosarum 
2007-03-17 | E-MEXP-1041 | biostudies-arrayexpress
TranscriptomicsscRNAseq of human fetal duodenum, 70 DPC
We performed single cell RNA sequencing (scRNA-seq) of human fetal duodenal tissue samples from a single individual biological specimen at 70 days post-conception (DPC). The data set is composed of cells from diverse intestinal lineages. Lineages captured include epithelium, mesenchyme, immune, neur...
ORGANISM(S): Homo sapiens 
2025-07-30 | E-MTAB-15358 | biostudies-arrayexpress
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