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TranscriptomicsRegulation of gene expression in Streptococcus gordonii by coaggregation with Actinomyces naeslundii
Oral streptococci, including Streptococcus gordonii, and Actinomyces naeslundii, are consistently found to be the most abundant bacteria in the early stages of dental plaque accumulation. These organisms interact physically (coaggregate) in vitro and in vivo. We hypothesized that coaggregation betwe...
ORGANISM(S): Streptococcus gordonii str. Challis 
2008-06-02 | E-GEOD-9478 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human children with mental retardation and immediate family members
The cause of mental retardation in one-third to one-half of all affected individuals is unknown. Microscopically-detectable chromosomal abnormalities are the most frequent recognized cause, but gain or loss of chromosomal segments that are too small to be seen by conventional cytogenetic analysis ha...
ORGANISM(S): Homo sapiens 
2008-06-21 | E-GEOD-7226 | biostudies-arrayexpress
TranscriptomicsStreptococcus gordonii gene response to the binding of human salivary amylase.
Streptococcus gordonii, an important primary colonizer of dental plaque biofilm, specifically binds to salivary amylase via the surface-associated amylase-binding protein A (AbpA). We hypothesized that amylase binding to S. gordonii modulates expression of chromosomal genes, which could influence ba...
ORGANISM(S): Streptococcus gordonii str. Challis 
2011-09-02 | E-GEOD-31830 | biostudies-arrayexpress
TranscriptomicsTranscriptome adaptation of group B Streptococcus to growth in human amniotic fluid
We have discovered that GBS significantly remodels its transcriptome in response to exposure to human amniotic fluid. A large number of the affected genes are of unknown function, which means that much remains to be learned about the full influence of amniotic fluid on GBS. The majority of the obse...
ORGANISM(S): Streptococcus agalactiae 
2010-05-18 | E-GEOD-14456 | biostudies-arrayexpress
TranscriptomicsEffects of Photosystem II Interfering Herbicides Atrazine and Bentazon on the Soybean Transcriptome 2
Atrazine and bentazon are both photosystem II inhibiting herbicides that interfere with photosynthetic electron transport provoking oxidative stress. While atrazine is lethal to soybean, bentazon does not kill soybeans because of the capability of soybeans to metabolize the herbicide. Gene expressio...
ORGANISM(S): Glycine max 
2010-03-23 | E-GEOD-15375 | biostudies-arrayexpress
TranscriptomicsEffects of Photosystem II Interfering Herbicides Atrazine and Bentazon on the Soybean Transcriptome 1
Atrazine and bentazon are both photosystem II inhibiting herbicides that interfere with photosynthetic electron transport provoking oxidative stress. While atrazine is lethal to soybean, bentazon does not kill soybeans because of the capability of soybeans to metabolize the herbicide. Gene expressio...
ORGANISM(S): Glycine max 
2010-03-23 | E-GEOD-15374 | biostudies-arrayexpress
GenomicsARID1A Mutations in Endometriosis-Associated Ovarian Carcinomas
We have sequenced the whole transcriptomes of 18 ovarian clear-cell carcinomas and 1 ovarian clear-cell carcinoma cell line and found somatic mutations in ARID1A (the AT-rich interactive domain 1A [SWI-like] gene) in 6 of the samples. ARID1A encodes BAF250a, a key component of the SWI–SNF chromati...
EGAS00000000075 | EGA
UnknownImpaired autophagy in macrophages promotes inflammatory eye disease.
Not available
S-EPMC5066937 | biostudies-literature
ProteomicsPROTEOMIC RESPONSE OF EARLY JUVENILE PACIFIC OYSTERS TO TEMPERATURE
The shellfish aquaculture industry provides a sustainable food source and jobs for a growing population. Oysters are the primary aquaculture species produced in the United States and account for a significant portion of seafood exports. Shellfish hatcheries have been experiencing frequent mass morta...
ORGANISM(S): Crassostrea gigas (Pacific oyster) (Crassostrea angulata) 
2022-03-03 | PXD015434 | Pride
Temperature Pacific oyster Proteomic Juvenile 
TranscriptomicsHigh-throughput RT-PCR analysis of Colon Adenocarcinoma Stem Cell Lines
Human early stage colon adenocarcinoma stem cell line was FACS-sorted for CCR9- and CCR9+ cell groups and differential expression was identified via Wafergen SmartChip RT-PCR gene expression profiling. CCR9- and CCR+ cells were FACS-sorted. 24 hours afterwards, cells were treated with 100ng/ml human...
ORGANISM(S): Homo sapiens 
2012-07-01 | E-GEOD-32290 | biostudies-arrayexpress
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