Microbial filaments

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UNIPROT ID/AC

3880.AES58538 (1)
3880.AES58539 (1)
3880.AES58546 (1)
3880.AES58557 (1)
3880.AES58564 (1)
3880.AES58577 (1)
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3880.AES58596 (1)
3880.AES58598 (1)
3880.AES58611 (1)
3880.AES58620 (1)
3880.AES58637 (1)
3880.AES58654 (1)
3880.AES58673 (1)
3880.AES58697 (1)
3880.AES58719 (1)
3880.AES58730 (1)
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3880.AES58766 (1)
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3880.AES58833 (1)
3880.AES58880 (1)
3880.AES58897 (1)
3880.AES58898 (1)
3880.AES58900 (1)
3880.AES58960 (1)
3880.AES58965 (1)

CHEBI ID

CHEBI:28790 (2)
CHEBI:16695 (2)
CHEBI:16704 (2)
CHEBI:48958 (1)
CHEBI 16345 (1)
CHEBI:37024|CHEBI:64303 (1)
CHEBI:35759 (1)
CHEBI:439329 (1)
CHEBI:84289 (1)
CHEBI:57865 (1)
CHEBI:9331 (1)
CHEBI:74327 (1)
CHEBI:4904 (1)
CHEBI:29988 (1)
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CHEBI:27749 (1)
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CHEBI:84242 (1)
CHEBI:16698 (1)
CHEBI:84272 (1)
CHEBI:84262 (1)
CHEBI:84273 (1)

Metabolite Name

Cadaverine (2)
L-Allothreonine (2)
L-Cysteine (2)
D-Glucose (2)
O-Phosphoethanolamine (2)
Beta-Alanyl-L-lysine (2)
2-Hydroxybutyric acid (2)
L-Proline (2)
L-Lysine (2)
Ornithine (2)
L-Aspartic acid (2)
L-Arginine (2)
L-Asparagine (2)
L-Threonine (2)
Serotonin (2)
Fumaric acid (2)
L-Histidine (2)
Uracil (2)
Thymine (2)
L-Tryptophan (2)
Dodecanoic acid (2)
Adenine (2)
D-Ribose (2)
Xanthine (2)
Uridine (2)
Gluconolactone (2)
L-Valine (2)
L-Leucine (2)
Inosine (2)
Uridine 5'-monophosphate 2 (1)

First Public Date

2013 (26)
2019 (3)
2023 (2)
2021 (2)
2016 (2)
2015 (2)
2026 (1)
2025 (1)
2020 (1)
2014 (1)

Classification

bacteria (4)
fungi (1)

Study type

Transcription profiling by array (5)
Transcription profiling by SAGE (1)
Plant - High-throughput sequencing (1)

Release Date

2022 (23)
2024 (22)
2020 (19)
2021 (18)
2025 (17)
2018 (16)
2019 (15)
2015 (14)
2014 (14)
2023 (12)
2016 (11)
2017 (10)
2013 (8)
2012 (5)
2005 (5)
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2007 (4)
2009 (3)
2011 (2)
2010 (2)
2006 (2)
1999 (2)
1998 (2)
2004 (1)
2003 (1)
2002 (1)
2001 (1)

Lab affiliation

Center for Microbial Communities Department of Chemistry and Bioscience Aalborg University (1)
Department of Biochemistry and Microbiology, Rutgers University, New Brunswick, NJ, USA (1)
Department of Biosciences, University of Durham, South Road, Durham, DH1 3LE, UK (1)

Tags

pathogen (5)
pathogen:bacterium (4)
xref:PubMed:30630824 (2)
xref:PubMed:20576116 (1)
xref:PubMed:23739051 (1)
xref:PubMed:24068964 (1)
pathogen:fungus (1)

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Metaproteogenomic profiling of chemosynthetic microbial biofilms reveals metabolic flexibility during colonization of a shallow-water gas vent

Tor Caldara is a shallow-water gas vent located in the Mediterranean Sea, with active venting of CO 2 , H 2 S. At Tor Caldara, filamentous microbial biofilms, mainly composed of Epsilon- and Gammaproteobacteria, grow on substrates exposed to the gas venting. In this study, we took a metaproteogenomi...

ORGANISM(S): microbial mat metagenome

2021-01-25 | PXD023357 | Pride

Multimodal multiscale analysis reveals flexible DNA contacts of bacterial nucleoprotein filaments

PRJNA661549 | ENA

Co-occurrence of direct and indirect extracellular electron transfer mechanisms during electroactive respiration in a dissimilatory sulfate reducing bacterium

Understanding the extracellular electron transfer mechanisms of electroactive bacteria could help determine their potential in microbial fuel cells (MFCs) and their microbial syntrophy with redox-active minerals in natural environments. However, the mechanisms of extracellular electron transfer t...

2024-12-06 | MTBLS11447 | MetaboLights

Transcriptome analysis of LfeRT32a in its natural microbial community comparing the biofilm and planktonic modes of life

Full title: Environmental transcriptome analysis of LfeRT32a in its natural microbial community comparing the biofilm and planktonic modes of life. Extreme acidic environments are characterized among other features by the high metal content and the lack of nutrients (oligotrophy). Macroscopic biofil...

ORGANISM(S): Leptospirillum ferrooxidans

2016-06-23 | GSE20267 | GEO

Convergent evolution in the supercoiling of prokaryotic flagellar filaments.

Not available

S-EPMC9500442 | biostudies-literature

Evolutionarily divergent Mycobacterium tuberculosis CTP synthase filaments are under selective pressure.

Not available

S-EPMC12219555 | biostudies-literature

Structure of Microbial Nanowires Reveals Stacked Hemes that Transport Electrons over Micrometers.

Not available

S-EPMC6720112 | biostudies-literature

De novo design of self-assembling helical protein filaments.