Microflow-swath & diann

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Proteomics (36)
Unknown (2)

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Allexis (31)
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pride (31)
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Technology Type

Mass Spectrometry (31)
SWATH MS (26)
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Lab affiliation

Instituto de Investigaciones Sanitarias de Santiago de Compostela (11)
Clinical Division of Fish Medicine, University of Veterinary Medicine, Vienna, Austria (3)
University Clinic for Poultry and Fish Medicine, University of Veterinary Medicine, Vienna, Austria (2)
Department of Biochemistry, Charité – Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Berlin Institute of Health, Berlin, Germany (1)
Head of Cell Signalling Unit, Children's Medical Research Institute, The University of Sydney Co-Director of ProCan - The ACRF International Centre for the Proteome of Human Cancer Co-Director of ACRF Centre for Kinomics (1)
Instituto de Investigaciones sanitarias de Santiago de Compostela (1)
Instutute of Genetics and Biotechnology, Faculty of Biology, University of Warsaw (1)
John van Geest Cancer Research Centre, Nottingham Trent University, UK (1)
Laboratory of Pharmaceutical Biotechnology. Department of Pharmaceutics, Ghent University, Belgium (1)
ProCan, Children's Medical Research Institute, University of Sydney (1)
ProCan®, Children’s Medical Research Institute, Faculty of Medicine and Health, The University of Sydney, Westmead, NSW, Australia. (1)
ProGenTomics, Laboratory of Pharmaceutical Biotechnology, Ghent University, B-9000 Ghent, Belgium (1)
Queensland Brain Institute, Univerisity of Queensland (1)
Queensland University of Technology (1)
The Francis Crick Institute, Molecular Biology of Metabolism laboratory, London, United Kingdom; Department of Biochemistry and Cambridge Systems Biology Centre, University of Cambridge, Cambridge, United Kingdom; Department of Biochemistry, Charité Universitaetsmedizin Berlin, Berlin, Germany (1)
The Francis Crick Institute, UK Charité – Universitätsmedizin Berlin, Germany (1)
The Francis Crick Institute; Charité – Universitätsmedizin Berlin (1)
The Molecular Biology of Metabolism Laboratory, The Francis Crick Institute, 1 Midland Rd, London NW1 1AT, UK (1)

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Microflow SWATH data analysed with DIA-NN

We have developed DIA-NN, an integrated software suite for fully-automated processing of raw SWATH/DIA data. DIA-NN enables deep and confident proteome coverage with fast chromatographic methods, paving the way for a new generation of high-throughput proteomics. This data set illustrates the capabil...

ORGANISM(S): Homo sapiens (Human) Saccharomyces cerevisiae (Baker's yeast)

2019-11-06 | PXD014690 | Pride

Metabolic consequences of mitochondrial genome loss

Yeast metabolic deficiency induced by deletion of mitochondrial DNA (mtDNA) was investigated by microflow SWATH proteomics.

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2021-11-25 | PXD011715 | Pride

Yeast Swath Microflow Lc-ms/ms

Wild-type and SeMeCo yeast proteomes with microFlow-SWATH & DIANN

Proteomic analysis of FACS-sorted and unsorted auxotrophic amd prototrophic subpopulations inSelf-establishing metabolically cooperating (SeMeCo) and control wild-type yeast communities. Microbial communities are composed of cells of varying metabolic capacity and regularly include auxotrophs; cells...

ORGANISM(S): Saccharomyces cerevisiae Saccharomyces cerevisiae (Baker's yeast)

2022-01-26 | PXD031160 | Pride

Sccharomyces cerevisiae Wild-type Proteomics Facs auxotrophs and prototrophs Semeco Microflow-swath & diann

Cost-effective generation of precise label-free quantitative proteomes in high-throughput by microLC and data-independent acquisition.

Not available

S-EPMC5847575 | biostudies-literature

Robust and High-Throughput Analytical Flow Proteomics Analysis of Cynomolgus Monkey and Human Matrices With Zeno SWATH Data-Independent Acquisition.

Not available

S-EPMC10267596 | biostudies-literature

Spectral library of Solanum lycopersicum for SWATH-MS

A spectral library was built for Solanum lycopersicum. The spectral library allows reproducible quantification for thousands of peptides per SWATH-MS analysis. Proteins from Solanum lycopersicum pericarp were digested with trypsin using in-gel digestion and the peptides were fractionated by high-pH...

ORGANISM(S): Solanum Lycopersicum (ncbitaxon:4081)

2017-05-11 | MSV000081074 | MassIVE

Spectral library of Drosophila melanogaster for SWATH-MS

A spectral library was built for Drosophila melanogaster. The spectral library allows reproducible quantification for thousands of peptides per SWATH-MS analysis. Proteins from Drosophila melanogaster embryo, adult flies were digested with trypsin using in-gel digestion and the peptides were fracti...

ORGANISM(S): Drosophila Melanogaster (ncbitaxon:7227)

2017-05-11 | MSV000081075 | MassIVE

Protein content of blood-derived extracellular vesicles. An approach to the pathophysiology of cerebral hemorrhage

Extracellular vesicles (EVs) participate in cell-to-cell paracrine signaling and can be biomarkers of the pathophysiological processes underlying disease. In intracerebral hemorrhage (ICH), the study of the number and molecular content of circulating EVs may help elucidate the biological mechanisms ...

ORGANISM(S): Rattus norvegicus (Rat)

2023-01-17 | PXD037246 | Pride

Extracellular vesicles Intracerebral hemorrhage Rat Proteomics Blood

Circulating extracellular vesicles promote recovery in a preclinical model of intracerebral haemorrhage.

ORGANISM(S): Rattus norvegicus (Rat)

2023-03-31 | PXD038630 | Pride

Extracellular vesicles Intracerebral hemorrhage Rat Proteomics Blood

Treatment choice matters in multiple sclerosis: The role of extracellular vesicles in predicting treatment response.

Multiple sclerosis (MS) is an immune-mediated central nervous system disease whose course is unpredictable. Finding biomarkers that help to better comprehend thedisease’s pathogenesis iscrucial for supporting clinical decision-making. Blood extracellular vesicles (EVs) are membrane-bound particles s...

ORGANISM(S): Homo sapiens (Human)

2025-10-20 | PXD038003 | Pride

Rheumatoid arthritis subcortical stroke.icles Blood exosomes extracellular vesicles multiple sclerosis proteomic analysis Extracellular vesbiomarkers Intracerebral hemorrhage Rat Proteomics Blood

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