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ProteomicsArabidopsis thaliana PSS1 TurboID C-teminal fusion
Arabidopsis, PSS1, miniTurbo, proximity labeling, nonhost resistance, Phytophthora sojae, protein interactome, mass spectrometry
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Phytophthora sojae 
2026-06-11 | PXD065664 | Pride
Nonhost resistance Arabidopsis Protein interactome Mass spectrometry Proximity labeling Pss1 Miniturbo Phytophthora sojae 
ProteomicsArabidopsis thaliana PSS1 TurboID N-teminal fusion
The Arabidopsis PSS1 gene, which encodes a glycine-rich protein, plays a pivotal role in nonhost resistance to the soybean oomycete Phytophthora sojae and the fungal pathogen Fusarium virguliforme. To elucidate the molecular basis of PSS1-mediated immunity, we employed miniTurbo-based proximity labe...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Phytophthora sojae 
2026-06-11 | PXD065660 | Pride
Nonhost resistance Arabidopsis Protein interactome Proximity labeling Pss1 Miniturbo Phytophthora sojae 
ProteomicsDRM6 and DLO1 TurboID-based proximity labelling proteomics
TurboID-based proximity labeling of DMR6 and DLO1 identified several candidate interactors, including a putative F-box protein that may contribute to their SCF-dependent turnover.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Nicotiana benthamiana 
2026-03-06 | PXD063821 | Pride
Skp1 Drm6 Salicylic acid Dlo1 Ask1 Proteasome Arabidopsis 
ProteomicsArabidopsis thaliana ASK1 proximity labeling upon Pst DC3000 infection
we used proximity labeling of ASK1, a core SCF adaptor, to profile dynamic changes in SCF-associated networks during Pseudomonas syringae infection. This analysis revealed widespread remodeling of F-box proteins and immune-related regulators, including several previously uncharacterized components.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2026-03-05 | PXD063820 | Pride
Skp1 Turboid Ask1 Proteasome Proximity labelling Arabidopsis 
ProteomicsBioorthogonal Click Chemistry for Antibody-Free Profiling of Acetylation, Propionylation, and Butyrylation in Pseudomonas aeruginosa and Methicillin-Resistant Staphylococcus aureus
Lysine acylation is a post-translational modification (PTM) conserved in all domains of life and is essential for regulating diverse biological processes. Traditional methods for investigating acylation rely on anti-acyl-lysine-antibodies, which are costly, time-consuming, and often exhibit variable...
ORGANISM(S): Pseudomonas aeruginosa (strain UCBPP-PA14) Staphylococcus aureus 
2026-06-11 | PXD072564 | Pride
Butyrylation Propionylation Posttranslational modifications Acetylation Bacterial acylation 
ProteomicsBIN2 and RAPTOR1B mutants phosphoproteomic analysis
Finely ground leaf tissue was used. Extraction was done in 8M urea, precipitated with acetone and methanol. Filter-assisted sample preparation (FASP) columns were used to further purify proteins. Purified proteins were reduced with TCEP, alkylated with iodoacetamide and digested into peptides with ...
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2020-11-17 | MSV000086460 | MassIVE
ProteomicsArabidopsis thaliana whole-proteome BIN2 kinase assay
Finely ground leaf tissue of wild-type columbia-0 ecotype was used. Protein extraction was performed in buffer-saturated phenol and high sucrose buffer. Extracted proteins were incubated with purified recombinant GST or GST-BIN2 kinase. Filter-assisted sample preparation (FASP) columns in prese...
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2020-11-17 | MSV000086462 | MassIVE
UnknownSystems Biology and Functional Assessments of Human iPSC-Cardiomyocyte Models of Insulin Resistance Capture Key Hallmarks of Diabetic Cardiomyopathy.
Not available
S-EPMC12585165 | biostudies-literature
ProteomicsSingle-cell proteomics differentiates Arabidopsis root cell types
Here we explore the feasibility of single-cell proteomics on plant samples. We focus on Arabidopsis thaliana, examining isolated single cells from the cortex and endodermis, which are two adjacent root cell-types derived from a common stem cell.
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2024-04-17 | MSV000094558 | MassIVE
ProteomicsPhosphorylation dynamics in a flg22-induced, G-protein dependent network reveals the RGS1 phosphatase
The Microbe Associated Molecular Pattern flg22 is recognized in a FLAGELLIN-SENSITVE 2-dependent manner in root tip cells. Here, we show a rapid and massive change in protein abundance and phosphorylation state of the Arabidopsis root cell proteome in wildtype and a mutant deficient in heterotrimer...
ORGANISM(S): Arabidopsis Thaliana (ncbitaxon:3702) 
2023-08-16 | MSV000092672 | MassIVE
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